WormBase Tree Display for Gene: WBGene00003850
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WBGene00003850 | SMap | S_parent | Sequence | C34D1 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | odr-3 | Person_evidence | WBPerson42 | |||||
Sequence_name | C34D1.3 | ||||||||
Molecular_name | C34D1.3 | ||||||||
C34D1.3.1 | |||||||||
CE08571 | |||||||||
Other_name | CELE_C34D1.3 | Accession_evidence | NDB | BX284605 | |||||
Public_name | odr-3 | ||||||||
DB_info | Database | AceView | gene | 5N728 | |||||
WormQTL | gene | WBGene00003850 | |||||||
WormFlux | gene | WBGene00003850 | |||||||
NDB | locus_tag | CELE_C34D1.3 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00003850|UniProtKB=Q18434 | |||||||
family | PTHR10218 | ||||||||
NCBI | gene | 179806 | |||||||
RefSeq | protein | NM_073889.3 | |||||||
SwissProt | UniProtAcc | Q18434 | |||||||
UniProt_GCRP | UniProtAcc | Q18434 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:33 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | odr | ||||||||
Allele (56) | |||||||||
Legacy_information | [Bargmann CI] defective chemotaxis to volatile odorants; osmotic avoidance defective | ||||||||
[C.elegansII] n2150 : reduced response to all volatile odorants; defective osmotic avoidance; some chemotactic defects. Cilia of sensory neuron AWC stunted. OA1: n2046 (weaker phenotypes). [Bargmann et al. 1993] | |||||||||
Strain | WBStrain00027155 | ||||||||
WBStrain00028996 | |||||||||
WBStrain00005221 | |||||||||
WBStrain00005238 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (33) | |||||||||
Ortholog (46) | |||||||||
Paralog (21) | |||||||||
Structured_description | Concise_description | odr-3 encodes a G protein alpha subunit; odr-3 activity is required for normal chemotaxis, odorant avoidance, and nociceptive function as well as cilium morphogenesis in chemosensory neurons; an ODR-3::GFP is expressed in five pairs of sensory neurons AWA, AWB, AWC, ASH, and ADF; the AWC neurons consistently express GFP most strongly, while the AWB neurons express at lower levels and the AWA, ASH, and ADF neurons express only weakly; in AWC neurons, ODR-3::GFP localizes to cilia which have a characteristic wing-shaped morphology. | Paper_evidence | WBPaper00002996 | |||||
WBPaper00024365 | |||||||||
Curator_confirmed | WBPerson1843 | ||||||||
Date_last_updated | 05 Nov 2007 00:00:00 | ||||||||
Automated_description | Enables olfactory receptor binding activity. Involved in several processes, including hyperosmotic response; olfactory behavior; and response to odorant. Located in neuronal cell body and non-motile cilium. Expressed in amphid neurons. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C34D1.3 | |||||||
Corresponding_transcript | C34D1.3.1 | ||||||||
Other_sequence (15) | |||||||||
Associated_feature | WBsf1001774 | ||||||||
WBsf1001775 | |||||||||
WBsf1001776 | |||||||||
WBsf1001777 | |||||||||
WBsf1001778 | |||||||||
WBsf1020690 | |||||||||
WBsf1020691 | |||||||||
WBsf1020692 | |||||||||
WBsf234783 | |||||||||
Experimental_info (9) | |||||||||
Map_info | Map | V | Position | 4.99556 | Error | 0.01206 | |||
Well_ordered | |||||||||
Positive | Positive_clone | C34D1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Mapping_data | Multi_point | 2052 | |||||||
2053 | |||||||||
2054 | |||||||||
4713 | |||||||||
5548 | |||||||||
Reference (150) | |||||||||
Method | Gene |