WormBase Tree Display for Gene: WBGene00003850
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| WBGene00003850 | SMap | S_parent | Sequence | C34D1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | odr-3 | Person_evidence | WBPerson42 | |||||
| Sequence_name | C34D1.3 | ||||||||
| Molecular_name | C34D1.3 | ||||||||
| C34D1.3.1 | |||||||||
| CE08571 | |||||||||
| Other_name | CELE_C34D1.3 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | odr-3 | ||||||||
| DB_info | Database | AceView | gene | 5N728 | |||||
| WormQTL | gene | WBGene00003850 | |||||||
| WormFlux | gene | WBGene00003850 | |||||||
| NDB | locus_tag | CELE_C34D1.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00003850|UniProtKB=Q18434 | |||||||
| family | PTHR10218 | ||||||||
| NCBI | gene | 179806 | |||||||
| RefSeq | protein | NM_073889.3 | |||||||
| SwissProt | UniProtAcc | Q18434 | |||||||
| UniProt_GCRP | UniProtAcc | Q18434 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:33 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | odr | ||||||||
| Allele | WBVar00090361 | Inferred_automatically | From strain object: CX2205 | ||||||
| WBVar00090219 | Inferred_automatically | From strain object: CX3222 | |||||||
| From strain object: NL2105 | |||||||||
| WBVar00090344 | Inferred_automatically | From strain object: MT4810 | |||||||
| WBVar00239272 | |||||||||
| WBVar02148587 | |||||||||
| WBVar02158919 | |||||||||
| WBVar00263146 | |||||||||
| WBVar00263147 | |||||||||
| WBVar02137389 | |||||||||
| WBVar00474483 | |||||||||
| WBVar01869276 | |||||||||
| WBVar00474484 | |||||||||
| WBVar01975219 | |||||||||
| WBVar01869277 | |||||||||
| WBVar00474485 | |||||||||
| WBVar01869278 | |||||||||
| WBVar01869279 | |||||||||
| WBVar00474486 | |||||||||
| WBVar01869280 | |||||||||
| WBVar01869281 | |||||||||
| WBVar01869282 | |||||||||
| WBVar01869283 | |||||||||
| WBVar01869284 | |||||||||
| WBVar01462426 | |||||||||
| WBVar01498809 | |||||||||
| WBVar01462427 | |||||||||
| WBVar02061748 | |||||||||
| WBVar02061749 | |||||||||
| WBVar01703184 | |||||||||
| WBVar01499621 | |||||||||
| WBVar01491348 | |||||||||
| WBVar01743890 | |||||||||
| WBVar01743891 | |||||||||
| WBVar01060159 | |||||||||
| WBVar01060160 | |||||||||
| WBVar01060161 | |||||||||
| WBVar01060162 | |||||||||
| WBVar01060163 | |||||||||
| WBVar01060164 | |||||||||
| WBVar01060165 | |||||||||
| WBVar01060166 | |||||||||
| WBVar01060167 | |||||||||
| WBVar01060168 | |||||||||
| WBVar01060169 | |||||||||
| WBVar01500212 | |||||||||
| WBVar01060170 | |||||||||
| WBVar01500213 | |||||||||
| WBVar01060171 | |||||||||
| WBVar01060172 | |||||||||
| WBVar01060173 | |||||||||
| WBVar01060174 | |||||||||
| WBVar01499299 | |||||||||
| WBVar02115598 | |||||||||
| WBVar00012200 | |||||||||
| WBVar02043678 | |||||||||
| WBVar01499316 | |||||||||
| Legacy_information | [Bargmann CI] defective chemotaxis to volatile odorants; osmotic avoidance defective | ||||||||
| [C.elegansII] n2150 : reduced response to all volatile odorants; defective osmotic avoidance; some chemotactic defects. Cilia of sensory neuron AWC stunted. OA1: n2046 (weaker phenotypes). [Bargmann et al. 1993] | |||||||||
| Strain | WBStrain00027155 | ||||||||
| WBStrain00028996 | |||||||||
| WBStrain00005221 | |||||||||
| WBStrain00005238 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (33) | |||||||||
| Ortholog (46) | |||||||||
| Paralog (21) | |||||||||
| Structured_description | Concise_description | odr-3 encodes a G protein alpha subunit; odr-3 activity is required for normal chemotaxis, odorant avoidance, and nociceptive function as well as cilium morphogenesis in chemosensory neurons; an ODR-3::GFP is expressed in five pairs of sensory neurons AWA, AWB, AWC, ASH, and ADF; the AWC neurons consistently express GFP most strongly, while the AWB neurons express at lower levels and the AWA, ASH, and ADF neurons express only weakly; in AWC neurons, ODR-3::GFP localizes to cilia which have a characteristic wing-shaped morphology. | Paper_evidence | WBPaper00002996 | |||||
| WBPaper00024365 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 05 Nov 2007 00:00:00 | ||||||||
| Automated_description | Enables olfactory receptor binding activity. Involved in several processes, including hyperosmotic response; olfactory behavior; and response to odorant. Located in neuronal cell body and non-motile cilium. Expressed in amphid neurons. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C34D1.3 | |||||||
| Corresponding_transcript | C34D1.3.1 | ||||||||
| Other_sequence (15) | |||||||||
| Associated_feature | WBsf1001774 | ||||||||
| WBsf1001775 | |||||||||
| WBsf1001776 | |||||||||
| WBsf1001777 | |||||||||
| WBsf1001778 | |||||||||
| WBsf1020690 | |||||||||
| WBsf1020691 | |||||||||
| WBsf1020692 | |||||||||
| WBsf234783 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00029513 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00011587 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00041860 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern (13) | |||||||||
| Drives_construct (83) | |||||||||
| Construct_product | WBCnstr00005410 | ||||||||
| WBCnstr00013107 | |||||||||
| WBCnstr00018501 | |||||||||
| WBCnstr00035830 | |||||||||
| Antibody | WBAntibody00000161 | ||||||||
| WBAntibody00000774 | |||||||||
| WBAntibody00001128 | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (121) | |||||||||
| Interaction (68) | |||||||||
| Anatomy_function | WBbtf0003 | ||||||||
| WBbtf0004 | |||||||||
| WBbtf1023 | |||||||||
| WBbtf1024 | |||||||||
| Map_info | Map | V | Position | 4.99556 | Error | 0.01206 | |||
| Well_ordered | |||||||||
| Positive | Positive_clone | C34D1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 2052 | |||||||
| 2053 | |||||||||
| 2054 | |||||||||
| 4713 | |||||||||
| 5548 | |||||||||
| Reference (150) | |||||||||
| Method | Gene |
