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WormBase Tree Display for Gene: WBGene00003763

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Name Class

WBGene00003763SMapS_parentSequenceY43F8C
IdentityVersion1
NameCGC_namenlp-25Person_evidenceWBPerson242
Sequence_nameY43F8C.1
Molecular_nameY43F8C.1
Y43F8C.1.1
CE21899
Other_nameCELE_Y43F8C.1Accession_evidenceNDBBX284605
Public_namenlp-25
DB_infoDatabaseAceViewgene5U81
WormQTLgeneWBGene00003763
WormFluxgeneWBGene00003763
NDBlocus_tagCELE_Y43F8C.1
NCBIgene189877
RefSeqproteinNM_075400.2
TrEMBLUniProtAccQ9XWP3
UniProt_GCRPUniProtAccQ9XWP3
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:32WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnlp
Allele (116)
StrainWBStrain00050879
RNASeq_FPKM (74)
GO_annotation00103717
OrthologWBGene00140816Caenorhabditis brenneriFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00065965Caenorhabditis remaneiFrom_analysisOMA
WormBase-Compara
CSP26.g2214Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g5707Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g19181Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP32.g11683Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g13131Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g5938Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g28918Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g8021Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g15635Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00431.g10764Caenorhabditis angariaFrom_analysisWormBase-Compara
Csp5_scaffold_04097.g32060Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_16634Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_021763Caenorhabditis remaneiFrom_analysisWormBase-Compara
chrV_pilon.g17922Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be involved in neuropeptide signaling pathway. Expressed in embryonic cell.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSY43F8C.1
Corresponding_transcriptY43F8C.1.1
Other_sequenceCSC00346_1
FD517738.1
Experimental_infoRNAi_resultWBRNAi00019971Inferred_automaticallyRNAi_primary
WBRNAi00056518Inferred_automaticallyRNAi_primary
WBRNAi00037059Inferred_automaticallyRNAi_primary
WBRNAi00020561Inferred_automaticallyRNAi_primary
Expr_patternExpr1690
Expr10680
Expr1019918
Expr1159991
Expr2014290
Expr2032530
Drives_constructWBCnstr00010381
WBCnstr00017450
Microarray_results (15)
Expression_cluster (245)
InteractionWBInteraction000119266
WBInteraction000521471
WBInteraction000549461
Map_infoMapVPosition22.4484Error0.025028
PositivePositive_cloneY43F8CInferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00004975
WBPaper00006390
WBPaper00028453
WBPaper00050183
WBPaper00060703
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene