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WormBase Tree Display for Gene: WBGene00003701

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Name Class

WBGene00003701SMapS_parentSequenceF44G3
IdentityVersion1
NameCGC_namenhr-111Person_evidenceWBPerson691
Sequence_nameF44G3.9
Molecular_nameF44G3.9
F44G3.9.1
CE35538
Other_nameCELE_F44G3.9Accession_evidenceNDBBX284605
Public_namenhr-111
DB_infoDatabase (12)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:32WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnhr
LaboratoryMU
Allele (51)
StrainWBStrain00031471
WBStrain00030117
RNASeq_FPKM (74)
GO_annotation (22)
Ortholog (22)
Paralog (44)
Structured_descriptionConcise_descriptionnhr-111 encodes a member of the nuclear receptor superfamily; by homology, NHR-111 is predicted to function as a ligand-dependent transcriptional regulator, but as loss of nhr-111 activity via large-scale RNAi screens does not result in any abnormalities, the precise role of NHR-111 in C. elegans development and/or behavior is not yet known; an nhr-111 reporter construct is expressed in embryos and early larvae in a pair of neurons in the ventral ganglion of the head and in two cells that may be the somatic gonad precursors.Paper_evidenceWBPaper00005654
WBPaper00010261
Curator_confirmedWBPerson1843
Date_last_updated17 Jun 2004 00:00:00
Automated_descriptionPredicted to enable RNA polymerase II cis-regulatory region sequence-specific DNA binding activity and nuclear receptor activity. Predicted to be involved in cell differentiation and positive regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Expressed in PVD; head neurons; intestine; pharynx; and somatic gonad precursor. Human ortholog(s) of this gene implicated in enhanced S-cone syndrome and retinitis pigmentosa 37. Is an ortholog of human NR2E3 (nuclear receptor subfamily 2 group E member 3).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:0090059Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:7974)
DOID:0110399Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:7974)
Molecular_infoCorresponding_CDSF44G3.9
Corresponding_CDS_historyF44G3.9:wp109
Corresponding_transcriptF44G3.9.1
Associated_featureWBsf653475
Transcription_factorWBTranscriptionFactor000512
Experimental_infoRNAi_resultWBRNAi00032265Inferred_automaticallyRNAi_primary
WBRNAi00014967Inferred_automaticallyRNAi_primary
WBRNAi00047336Inferred_automaticallyRNAi_primary
WBRNAi00076432Inferred_automaticallyRNAi_primary
WBRNAi00107731Inferred_automaticallyRNAi_primary
Expr_patternExpr10052
Expr1010659
Expr1151189
Expr1200091
Expr2014009
Expr2032249
Drives_constructWBCnstr00015024
WBCnstr00035933
Construct_productWBCnstr00021796
WBCnstr00035933
Microarray_results (17)
Expression_cluster (31)
InteractionWBInteraction000029980
WBInteraction000030156
WBInteraction000030570
WBInteraction000030589
WBInteraction000030808
WBInteraction000031037
WBInteraction000031321
WBInteraction000031397
WBInteraction000031398
WBInteraction000031399
WBInteraction000031400
WBInteraction000031401
WBInteraction000031402
WBInteraction000031403
WBInteraction000031404
WBInteraction000031405
WBInteraction000031406
WBInteraction000031407
WBInteraction000031408
WBInteraction000031409
WBInteraction000031410
WBInteraction000031411
WBInteraction000031412
WBInteraction000031413
WBInteraction000031414
WBInteraction000031415
WBInteraction000031416
WBInteraction000031417
WBInteraction000031418
WBInteraction000031419
WBInteraction000031420
WBInteraction000031421
WBInteraction000031422
WBInteraction000031423
WBInteraction000031424
WBInteraction000031425
WBInteraction000031426
WBInteraction000031427
WBInteraction000031428
WBInteraction000031429
WBInteraction000031430
WBInteraction000031431
WBInteraction000031432
WBInteraction000031433
WBInteraction000031434
WBInteraction000031435
WBInteraction000031436
WBInteraction000031437
WBInteraction000031438
WBInteraction000031439
WBInteraction000031440
WBInteraction000031441
WBInteraction000031442
WBInteraction000121737
WBInteraction000146208
WBInteraction000178564
WBInteraction000182465
WBInteraction000189089
WBInteraction000201087
WBInteraction000209053
WBInteraction000210590
WBInteraction000229643
WBInteraction000231884
WBInteraction000250598
WBInteraction000264481
WBInteraction000276415
WBInteraction000287114
WBInteraction000335517
WBInteraction000362508
WBInteraction000364576
WBInteraction000382014
WBInteraction000382377
WBInteraction000384164
WBInteraction000384258
WBInteraction000384259
WBInteraction000384260
WBInteraction000384261
WBInteraction000384262
WBInteraction000384263
WBInteraction000384264
WBInteraction000384444
WBInteraction000384467
WBInteraction000384621
WBInteraction000404021
WBInteraction000407814
WBInteraction000430147
WBInteraction000449310
WBInteraction000462479
WBInteraction000505221
WBInteraction000505281
WBInteraction000505299
WBInteraction000505303
WBInteraction000505346
WBInteraction000505385
WBInteraction000505438
WBInteraction000505539
WBInteraction000505589
WBInteraction000505634
WBInteraction000505659
WBInteraction000505660
WBInteraction000505661
WBInteraction000505662
WBInteraction000505663
WBInteraction000505664
WBInteraction000505665
WBInteraction000505666
WBInteraction000505667
WBInteraction000505668
WBInteraction000505669
WBInteraction000505670
WBInteraction000505671
WBInteraction000505672
WBInteraction000505673
WBInteraction000505674
WBInteraction000505675
WBInteraction000505676
WBInteraction000505677
WBInteraction000505678
WBInteraction000505679
WBInteraction000505680
WBInteraction000505681
WBInteraction000505682
WBInteraction000505683
WBInteraction000505684
WBInteraction000505685
WBInteraction000505686
WBInteraction000505687
WBInteraction000505688
WBInteraction000505689
WBInteraction000505690
WBInteraction000505692
WBInteraction000505693
WBInteraction000505694
WBInteraction000505695
WBInteraction000505696
WBInteraction000505697
WBInteraction000505698
WBInteraction000505699
WBInteraction000505700
WBInteraction000505701
WBInteraction000505702
WBInteraction000505703
WBInteraction000505704
WBInteraction000505705
WBInteraction000505706
WBInteraction000505707
WBInteraction000505708
WBInteraction000505709
WBInteraction000506283
WBInteraction000506284
WBInteraction000506285
WBInteraction000506290
WBInteraction000506291
WBInteraction000506292
WBInteraction000506293
WBInteraction000506294
WBInteraction000506295
WBInteraction000506296
WBInteraction000506297
WBInteraction000506298
WBInteraction000506807
WBInteraction000506810
WBInteraction000506811
WBInteraction000506812
WBInteraction000506813
WBInteraction000506816
WBInteraction000506818
WBInteraction000506820
WBInteraction000506822
WBInteraction000506827
WBInteraction000506828
WBInteraction000506829
WBInteraction000506830
WBInteraction000506831
WBInteraction000506832
WBInteraction000506835
WBInteraction000506837
WBInteraction000506841
WBInteraction000506842
WBInteraction000506843
WBInteraction000506844
WBInteraction000506845
WBInteraction000506846
WBInteraction000506847
WBInteraction000506874
WBInteraction000507062
WBInteraction000507063
WBInteraction000507065
WBInteraction000507069
WBInteraction000507071
WBInteraction000507073
WBInteraction000507418
WBInteraction000507439
WBInteraction000507628
WBInteraction000507629
WBInteraction000507631
WBInteraction000507632
WBInteraction000507633
WBInteraction000507636
WBInteraction000507637
WBInteraction000507638
WBInteraction000507639
WBInteraction000507640
WBInteraction000507641
WBInteraction000507642
WBInteraction000507643
WBInteraction000507644
WBInteraction000507645
WBInteraction000507646
WBInteraction000507647
WBInteraction000507648
WBInteraction000507649
WBInteraction000507650
WBInteraction000507651
WBInteraction000507652
WBInteraction000507653
WBInteraction000507654
WBInteraction000507655
WBInteraction000507656
WBInteraction000508074
WBInteraction000508087
WBInteraction000508114
WBInteraction000508150
WBInteraction000508162
WBInteraction000508384
WBInteraction000508513
WBInteraction000508522
WBInteraction000509471
WBInteraction000509518
WBInteraction000509881
WBInteraction000509882
WBInteraction000509883
WBInteraction000509884
WBInteraction000509885
WBInteraction000509886
WBInteraction000509887
WBInteraction000509888
WBInteraction000509889
WBInteraction000509890
WBInteraction000509891
WBInteraction000509892
WBInteraction000509893
WBInteraction000509894
WBInteraction000509895
WBInteraction000509896
WBInteraction000509897
WBInteraction000509898
WBInteraction000509899
WBInteraction000509900
WBInteraction000509901
WBInteraction000509902
WBInteraction000509903
WBInteraction000509904
WBInteraction000509905
WBInteraction000509907
WBInteraction000509908
WBInteraction000509910
WBInteraction000509911
WBInteraction000509912
WBInteraction000509913
WBInteraction000509914
WBInteraction000509915
WBInteraction000509916
WBInteraction000509917
WBInteraction000510043
WBInteraction000510047
WBInteraction000510052
WBInteraction000510070
WBInteraction000510075
WBInteraction000512135
WBInteraction000512144
WBInteraction000512145
WBInteraction000512147
WBInteraction000512148
WBInteraction000512149
WBInteraction000512150
WBInteraction000512151
WBInteraction000512152
WBInteraction000512153
WBInteraction000512154
WBInteraction000512155
WBInteraction000512156
WBInteraction000512157
WBInteraction000512158
WBInteraction000512159
WBInteraction000512160
WBInteraction000512161
WBInteraction000512162
WBInteraction000512163
WBInteraction000512164
WBInteraction000512165
WBInteraction000512166
WBInteraction000512167
WBInteraction000512168
WBInteraction000512169
WBInteraction000512170
WBInteraction000512171
WBInteraction000512492
WBInteraction000512493
WBInteraction000512494
WBInteraction000512495
WBInteraction000512496
WBInteraction000512499
WBInteraction000512500
WBInteraction000512501
WBInteraction000512502
WBInteraction000512503
WBInteraction000512505
WBInteraction000512506
WBInteraction000512513
WBInteraction000512514
WBInteraction000512515
WBInteraction000512521
WBInteraction000512522
WBInteraction000512551
WBInteraction000521551
WBInteraction000525444
WBInteraction000525456
WBInteraction000525488
WBInteraction000525500
WBInteraction000525545
WBInteraction000525576
WBInteraction000525599
WBInteraction000525650
WBInteraction000525680
WBInteraction000525740
WBInteraction000525807
WBInteraction000525842
WBInteraction000525854
WBInteraction000525881
WBInteraction000525948
WBInteraction000526017
WBInteraction000526061
WBInteraction000526095
WBInteraction000526130
WBInteraction000526144
WBInteraction000526152
WBInteraction000526198
WBInteraction000526228
WBInteraction000526257
WBInteraction000526327
WBInteraction000526379
WBInteraction000526403
WBInteraction000526614
WBInteraction000526744
WBInteraction000526765
WBInteraction000526766
WBInteraction000526767
WBInteraction000526768
WBInteraction000526769
WBInteraction000526770
WBInteraction000526771
WBInteraction000526772
WBInteraction000526773
WBInteraction000526774
WBInteraction000526794
WBInteraction000526849
WBInteraction000526901
WBInteraction000527068
WBInteraction000527149
WBInteraction000527189
WBInteraction000527216
WBInteraction000527331
WBInteraction000527444
WBInteraction000527563
WBInteraction000527721
WBInteraction000527814
WBInteraction000527832
WBInteraction000527864
WBInteraction000528094
WBInteraction000528105
WBInteraction000528848
WBInteraction000528982
WBInteraction000533087
WBInteraction000533156
WBInteraction000533179
WBInteraction000533296
WBInteraction000534282
WBInteraction000534343
WBInteraction000534517
WBInteraction000534561
WBInteraction000534593
WBInteraction000544233
WBInteraction000544239
WBInteraction000544243
WBInteraction000544251
WBInteraction000544254
WBInteraction000547138
WBInteraction000547380
WBInteraction000547393
WBInteraction000547477
WBInteraction000548011
WBInteraction000548049
WBInteraction000548076
WBInteraction000548077
WBInteraction000548078
WBInteraction000548079
WBInteraction000548080
WBInteraction000548081
WBInteraction000548082
WBInteraction000548083
WBInteraction000548084
WBInteraction000548085
WBInteraction000550779
WBInteraction000550826
WBInteraction000551046
Map_infoMapVPosition9.74878Error0.031354
PositivePositive_cloneF44G3Inferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Mapping_dataMulti_point4529
4662
5344
Pseudo_map_position
ReferenceWBPaper00010261
WBPaper00010476
WBPaper00010679
WBPaper00018025
WBPaper00027309
WBPaper00034447
WBPaper00041200
WBPaper00063946
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene