WormBase Tree Display for Gene: WBGene00003692
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WBGene00003692 | SMap | S_parent | Sequence | T06C12 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | nhr | ||||||
Allele (35) | |||||||
Strain | WBStrain00035353 | ||||||
WBStrain00030227 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00102530 | ||||||
00102531 | |||||||
00102532 | |||||||
00111565 | |||||||
00111566 | |||||||
00111567 | |||||||
00111568 | |||||||
Contained_in_operon | CEOP5448 | ||||||
Ortholog (38) | |||||||
Paralog (217) | |||||||
Structured_description | Concise_description | nhr-102 encodes a nuclear receptor that is most highly conserved amongst nematode species. | Paper_evidence | WBPaper00027309 | |||
Curator_confirmed | WBPerson1843 | ||||||
Date_last_updated | 17 May 2007 00:00:00 | ||||||
Automated_description | Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | T06C12.6 | |||||
Corresponding_transcript | T06C12.6.1 | ||||||
Other_sequence | EV854163.1 | ||||||
Associated_feature | WBsf978525 | ||||||
WBsf1002357 | |||||||
WBsf1002358 | |||||||
WBsf1021066 | |||||||
WBsf1021067 | |||||||
WBsf1021068 | |||||||
WBsf235093 | |||||||
WBsf235094 | |||||||
Transcription_factor | WBTranscriptionFactor000362 | ||||||
Experimental_info | RNAi_result | WBRNAi00052631 | Inferred_automatically | RNAi_primary | |||
WBRNAi00052630 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00084690 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00033601 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Chronogram105 | ||||||
Expr7653 | |||||||
Expr1016890 | |||||||
Expr1031719 | |||||||
Expr1156234 | |||||||
Expr2013999 | |||||||
Expr2032239 | |||||||
Drives_construct | WBCnstr00001163 | ||||||
WBCnstr00012798 | |||||||
WBCnstr00035941 | |||||||
Construct_product | WBCnstr00016825 | ||||||
WBCnstr00016841 | |||||||
WBCnstr00035941 | |||||||
Microarray_results (18) | |||||||
Expression_cluster (109) | |||||||
Interaction (25) | |||||||
Map_info | Map | V | Position | 9.0507 | Error | 0.007464 | |
Positive | Positive_clone | T06C12 | Inferred_automatically | From CDS info | |||
From sequence, transcript, pseudogene data | |||||||
Mapping_data | Multi_point | 5343 | |||||
Pseudo_map_position | |||||||
Reference | WBPaper00027309 | ||||||
WBPaper00050371 | |||||||
WBPaper00061738 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |