WormBase Tree Display for Gene: WBGene00003691

WBGene00003691 SMap: S_parent: Sequence: H12C20
  Identity: Version: 1
    Name: CGC_name: nhr-101 Person_evidence: WBPerson600
      Sequence_name: H12C20.6
      Molecular_name: H12C20.6a
        H12C20.6a.1
        CE31964
        H12C20.6a.2
        H12C20.6b
      Other_name: CELE_H12C20.6 Accession_evidence: NDB BX284605
      Public_name: nhr-101
    DB_info: Database: WormQTL gene WBGene00003691
        WormFlux gene WBGene00003691
        NDB locus_tag CELE_H12C20.6
        Panther gene CAEEL|WormBase=WBGene00003691|UniProtKB=Q95ZS3
          family PTHR24083
        NCBI gene 179588
        RefSeq protein NR_003173.1
            NM_001047676.6
        TREEFAM TREEFAM_ID TF321623
        TrEMBL UniProtAcc Q95ZS3
        UniProt_GCRP UniProtAcc Q95ZS3
        RNAcentral URSid URS0000362E29
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:32 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nhr
    Allele (29)
    Strain: WBStrain00036495
    RNASeq_FPKM (74)
    GO_annotation (14)
    Ortholog (19)
    Paralog (216)
    Structured_description: Concise_description: nhr-101 encodes a member of the nuclear hormone receptor family. Curator_confirmed: WBPerson48
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Predicted to enable RNA polymerase II cis-regulatory region sequence-specific DNA binding activity and nuclear receptor activity. Predicted to be involved in cell differentiation and regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: H12C20.6a
    Corresponding_CDS_history: H12C20.6:wp87
    Corresponding_transcript: H12C20.6b
      H12C20.6a.1
      H12C20.6a.2
    Associated_feature: WBsf647274
      WBsf647275
      WBsf647276
      WBsf661749
      WBsf661750
      WBsf978865
      WBsf232520
      WBsf232521
    Transcription_factor: WBTranscriptionFactor000284
  Experimental_info: RNAi_result: WBRNAi00000801 Inferred_automatically: RNAi_primary
      WBRNAi00049370 Inferred_automatically: RNAi_primary
      WBRNAi00107413 Inferred_automatically: RNAi_primary
      WBRNAi00107536 Inferred_automatically: RNAi_primary
      WBRNAi00107091 Inferred_automatically: RNAi_primary
      WBRNAi00107597 Inferred_automatically: RNAi_primary
      WBRNAi00107492 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1021061
      Expr1031718
      Expr1153098
      Expr2013998
      Expr2032238
    Drives_construct: WBCnstr00035942
    Construct_product: WBCnstr00035942
    Microarray_results (18)
    Expression_cluster (118)
    Interaction: WBInteraction000534947
      WBInteraction000534950
      WBInteraction000534974
      WBInteraction000535012
      WBInteraction000535084
  Map_info: Map: V Position: 3.20724 Error: 0.000319
    Positive: Positive_clone: H12C20 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00027309
    WBPaper00034489
    WBPaper00048645
  Remark: yk732c8 - not predicted by genefinder - in large intron of gene on opposite strand [Sluder A][030102 ck1]
    Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene