Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00003622

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00003622EvidencePaper_evidenceWBPaper00003081
SMapS_parentSequenceC01H6
IdentityVersion2
NameCGC_namenhr-23
Sequence_nameC01H6.5
Molecular_name (18)
Other_namecnr-3
chr3Accession_evidenceEMBLU51136
U13075
let-527Person_evidenceWBPerson533
CELE_C01H6.5Accession_evidenceNDBBX284601
Public_namenhr-23
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:32WBPerson1971EventImportedInitial conversion from geneace
205 Mar 2015 08:45:20WBPerson2970EventAcquires_mergeWBGene00002718
Name_changeOther_namelet-527
Acquires_mergeWBGene00002718
StatusLive
Gene_info (14)
Disease_infoPotential_modelDOID:0111316Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:10259)
DOID:0111940Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:10260)
Molecular_infoCorresponding_CDSC01H6.5a
C01H6.5b
C01H6.5c
C01H6.5d
C01H6.5e
C01H6.5f
Corresponding_CDS_historyC01H6.5:wp77
Corresponding_transcriptC01H6.5a.1
C01H6.5b.1
C01H6.5c.1
C01H6.5d.1
C01H6.5e.1
C01H6.5f.1
Other_sequence (18)
Associated_feature (21)
Gene_product_binds (373)
Transcription_factorWBTranscriptionFactor000696
Experimental_infoRNAi_result (64)
Expr_pattern (22)
Drives_constructWBCnstr00010272
WBCnstr00014256
WBCnstr00014269
WBCnstr00014280
WBCnstr00014301
WBCnstr00035993
Construct_productWBCnstr00010272
WBCnstr00015392
WBCnstr00015946
WBCnstr00016818
WBCnstr00019986
WBCnstr00019989
WBCnstr00035993
Regulate_expr_clusterWBPaper00040185:nhr-23(RNAi)_downregulated
WBPaper00064502:nhr-23(kry61);spe-44(fx110)_downregulated
WBPaper00064502:nhr-23(kry61);spe-44(fx110)_upregulated
WBPaper00064502:nhr-23(kry61)_downregulated
WBPaper00064502:nhr-23(kry61)_upregulated
AntibodyWBAntibody00001821
Microarray_results (46)
Expression_clusterWBPaper00031040:TGF-beta_adult_downregulated
WBPaper00036375:enriched_in_PVD_OLL
WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
WBPaper00037950:germline-precursors_blastula-embryo_expressed
WBPaper00037950:hypodermis_L1-larva_expressed
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00038438:P.lumniescens_24hr_upregulated_RNAseq
WBPaper00040221:DAF-12_target_ALF4
WBPaper00040285:H2S_24hr_upregulated
WBPaper00041222:unc-120(st364)_downregulated
WBPaper00042561:smg-2(RNAi)_downregulated
WBPaper00044656:tatn-1(qd182)_downregulated
WBPaper00044736:oscillating_dev_expression
WBPaper00044760:germline_specific
WBPaper00045420:fertilization_downregulated_transcript
WBPaper00045521:Spermatogenic
WBPaper00045729:gld-2(RNAi)_downregulated
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_12h
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_6h
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_12h
WBPaper00046887:WNT-target
WBPaper00048762:FOG-3_associated
WBPaper00048923:Aging_regulated
WBPaper00048988:daf-2(e1370)_daf-16(mu86)_upregulated_neuron
WBPaper00048988:neuron_expressed
WBPaper00049545:cco-1(RNAi)_upregulated
WBPaper00049545:jmjd-3.1(+)_upregulated
WBPaper00049545:rgef-1p-jmjd-1.2(+)_upregulated
WBPaper00049545:sur-5p-jmjd-1.2(+)_upregulated
WBPaper00049732:blmp-1(tm548);daf-7(e1372ts)_vs_daf-7(e1372ts)_downregulated
WBPaper00049942:HeatShock_upregulated_hsf-1(RNAi)
WBPaper00049942:hsf-1(RNAi)_upregulated
WBPaper00050234:lin-28(RNAi)_upregulated
WBPaper00050370:dpy-21(e428)_L3_upregulated
WBPaper00050412:cco-1(RNAi)_upregulated_N2
WBPaper00050488:20C_vs_25C_regulated_mir-34(OverExpression)_adult
WBPaper00050488:20C_vs_25C_regulated_N2_adult
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050726:OsmoticStress_regulated_NoFood
WBPaper00050859:downregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050990:hypodermis_enriched
WBPaper00050990:hypodermis_expressed
WBPaper00051039:germline_enriched
WBPaper00051265:F1_morc-1(tm6048)_downregulated
WBPaper00052884:emb-4(hc60)_downregulated
WBPaper00053184:sma-2(rax5)_downregulated
WBPaper00053184:sma-4(rax3)_downregulated
WBPaper00053302:alovudine_24h_regulated
WBPaper00053302:zidovudine_24h_regulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053321:PGCs_enriched_NuGen
WBPaper00053388:dauer_regulated_Cluster1
WBPaper00053713:Starvation-induced_postdauer_vs_control_downregulated
WBPaper00053810:daf-2(e1370)_upregulated
WBPaper00055334:DLC-1_interacting
WBPaper00055354:eat-2(ad1116)_upregulated
WBPaper00055354:Rapamycin-Allantoin_upregulated
WBPaper00055354:Rapamycin_upregulated
WBPaper00055626:pry-1(mu38)_upregulated
WBPaper00055648:germline_expressed
WBPaper00055804:FBF-1-FBF-2-associated_spermatogenic-enriched
WBPaper00055971:nhl-2(ok818)_25C_upregulated
WBPaper00056034:pals-22(jy3)_downregulated
WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
WBPaper00056290:hsp-6(mg585)_downregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
WBPaper00056826:hmc_biased
WBPaper00058691:sin-3(tm1276)_upregulated
WBPaper00058969:RIS_depleted
WBPaper00059537:ngn-1(ok2200)_downregulated
WBPaper00060100:SiNP_upregulated_mRNA
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060434:pH4.33_vs_pH6.33_downrgulated
WBPaper00060683:hlh-11(ko1)_downregulated
WBPaper00060811:L1_vs_adult_downregulated_neural
WBPaper00061274:hypergravity_15xg_upregulated
WBPaper00061274:microgravity_upregulated
WBPaper00061340:ADEsh
WBPaper00061340:AMso
WBPaper00061340:CEPsh
WBPaper00061340:CEPso
WBPaper00061340:Excretory_duct_and_pore
WBPaper00061340:F_U
WBPaper00061340:G2_and_W_blasts
WBPaper00061340:Glia
WBPaper00061340:hyp1V_and_ant_arc_V
WBPaper00061340:hyp1_hyp2
WBPaper00061340:hyp3
WBPaper00061340:hyp4_hyp5_hyp6
WBPaper00061340:ILsh_OLLsh_OLQsh
WBPaper00061340:ILso
WBPaper00061340:K_Kprime
WBPaper00061340:P_cell
WBPaper00061340:T
WBPaper00061340:Tail_hypodermis
WBPaper00061340:Y
WBPaper00061527:dld-1-skn-1_16701
WBPaper00061527:gpb-1_3783-C48A7.2_22459
WBPaper00061753:csr-1(tor159)_downregulated_25C
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062590:Aging_downregulated_neuron
WBPaper00064088:Day-1-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-1-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064716:paraquat_upregulated
WBPaper00064871:hypoxia_upregulated_F1
WBPaper00064933:bcf-1(ylf1)_upregulated_transcript
WBPaper00065086:JU1400_N.ferruginous_regulated
WBPaper00065746:eat-2(ad1113)_downregulated
WBPaper00065975:P-body_vs_oocyte_enriched
WBPaper00065975:P-body_vs_WholeAnimal_enriched
WBPaper00065993:glp-1(e2141)_downregulated
WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
cgc4489_group_24
WBPaper00025032:cluster_88
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00028474:dys-1_downregulated
WBPaper00031532:Larva_Pan_Neuronal_Depleted
WBPaper00034739:N2lessDR1350
WBPaper00035873:dpy-9_regulated
WBPaper00035905:FBF-1_Associated
WBPaper00037611:GLD-2-associated
WBPaper00037611:RNP-8-associated
WBPaper00037695:WC_CC_6-day
WBPaper00037901:GLD-1_mRNA_targets
WBPaper00038172:crh-1null_up_regulated
WBPaper00040963:TA100_down
WBPaper00040963:TA200_up
WBPaper00040963:TA300_down
WBPaper00041002:HF_11d_0.2mM_Up
WBPaper00041002:HF_11d_2.0mM_Up
WBPaper00041939:control_vs_EtBr-exposed_51h
WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
WBPaper00045263:0.1mM-paraquat_upregulated
WBPaper00045960:L1-L4-lethargus_downregulated
WBPaper00045960:L4-lethargus_downregulated
WBPaper00047070:N2_starvation_downregulated
WBPaper00047070:N2_UV_upregulated
WBPaper00047070:xpa-1_UV_upregulated
WBPaper00048989:eat-2(ad465)_rapamycin_upregulated
WBPaper00053236:Starvation_regulated_N2
WBPaper00057098:SiO2-nanoparticles_upregulated
[cgc6390]:intrinsic
Interaction (80)
Map_infoMapIPosition1.84212Error0.002193
PositivePositive_cloneC01H6Author_evidence(degenerate PCR,
Inferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_dataMulti_point4521
Pos_neg_data5397
5398
5399
5400
6574
6272
6347
Pseudo_map_position
Reference (75)
RemarkSplice variants added 02/04/08 krb
Peptides of chr-3 and C01H6.5a/b are identical [020918 ck1]
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
moving to left of unc-14 jah/sdm 8.97
MethodGene