WormBase Tree Display for Gene: WBGene00003603

WBGene00003603 Evidence: Paper_evidence: WBPaper00003416
  SMap: S_parent: Sequence: F32B6
  Identity: Version: 1
    Name: CGC_name: nhr-4 Person_evidence: WBPerson600
      Sequence_name: F32B6.1
      Molecular_name: F32B6.1
        F32B6.1.1
        CE24934
      Other_name: CELE_F32B6.1 Accession_evidence: NDB BX284604
      Public_name: nhr-4
    DB_info: Database: AceView gene 4K645
        WormQTL gene WBGene00003603
        WormFlux gene WBGene00003603
        NDB locus_tag CELE_F32B6.1
        Panther gene CAEEL|WormBase=WBGene00003603|UniProtKB=O45436
          family PTHR47630
        NCBI gene 177839
        RefSeq protein NM_069374.11
        SwissProt UniProtAcc O45436
        TREEFAM TREEFAM_ID TF315528
        UniProt_GCRP UniProtAcc O45436
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:32 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nhr
    Allele (32)
    Legacy_information: NMK. Nuclear hormone receptor superfamily. [AE]
      [C.elegansII] NMK. Nuclear hormone receptor superfamily. Cosmid ZZH8 [AE]
    RNASeq_FPKM (74)
    GO_annotation: 00034514
      00034515
      00034516
      00034517
      00111214
      00111215
      00111216
      00111217
    Ortholog (30)
    Paralog (217)
    Structured_description: Concise_description: nhr-4 is predicted to encode a nuclear hormone receptor (NHR); expression may peak during the late larval stages, based on mRNA expression analysis. Paper_evidence: WBPaper00003416
            WBPaper00012651
          Curator_confirmed: WBPerson48
          Date_last_updated: 14 Jul 2005 00:00:00
      Automated_description: Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. Expressed in intestine; neurons; pharynx; and tail. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F32B6.1
    Corresponding_transcript: F32B6.1.1
    Other_sequence: AF083223
      Dviv_isotig00046
      Oden_isotig19183
      HBC17808_1
      EX010038.1
      Dviv_isotig00044
      Hbac_isotig04554
      Dviv_isotig00045
      Tcir_isotig29936
      CBC06120_1
    Associated_feature (11)
    Transcription_factor: WBTranscriptionFactor000304
  Experimental_info: RNAi_result: WBRNAi00014201 Inferred_automatically: RNAi_primary
      WBRNAi00027855 Inferred_automatically: RNAi_primary
      WBRNAi00046110 Inferred_automatically: RNAi_primary
      WBRNAi00115821 Inferred_automatically: RNAi_primary
      WBRNAi00094997 Inferred_automatically: RNAi_primary
    Expr_pattern (11)
    Drives_construct: WBCnstr00002707
      WBCnstr00012040
      WBCnstr00012041
      WBCnstr00036009
    Construct_product: WBCnstr00036009
    Microarray_results (20)
    Expression_cluster (100)
    Interaction (31)
  Map_info: Map: IV Position: 4.43619 Error: 0.000369
    Positive: Positive_clone: F32B6 Inferred_automatically: From sequence, transcript, pseudogene data
        F49C8 Person_evidence: WBPerson600
        Y37F11 Person_evidence: WBPerson600
        Y39E2 Person_evidence: WBPerson600
        Y43F7 Person_evidence: WBPerson600
        Y49F10 Person_evidence: WBPerson600
        ZK1264 Person_evidence: WBPerson600
        ZZH8 Person_evidence: WBPerson600
    Pseudo_map_position
  Reference: WBPaper00003416
    WBPaper00012651
    WBPaper00027076
    WBPaper00027309
    WBPaper00030829
    WBPaper00063946
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene