WormBase Tree Display for Gene: WBGene00003596

WBGene00003596 Evidence: Author_evidence: Slack FJ
  SMap: S_parent: Sequence: T19A6
  Identity: Version: 1
    Name: CGC_name: ngp-1 Person_evidence: WBPerson599
      Sequence_name: T19A6.2
      Molecular_name: T19A6.2a
        T19A6.2a.1
        CE32493
        T19A6.2b
        CE32494
        T19A6.2b.1
      Other_name: CELE_T19A6.2 Accession_evidence: NDB BX284601
      Public_name: ngp-1
    DB_info: Database: AceView gene 1I973
        WormQTL gene WBGene00003596
        WormFlux gene WBGene00003596
        NDB locus_tag CELE_T19A6.2
        Panther gene CAEEL|WormBase=WBGene00003596|UniProtKB=Q9XXN4
          family PTHR11089
        NCBI gene 172624
        RefSeq protein NM_059874.6
            NM_001392677.1
        TREEFAM TREEFAM_ID TF105668
        TrEMBL UniProtAcc Q9U365
            Q9XXN4
        UniProt_GCRP UniProtAcc Q9XXN4
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:32 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ngp
    Allele (48)
    Strain: WBStrain00003165
    RNASeq_FPKM (74)
    GO_annotation: 00099996
      00099997
      00099998
      00099999
      00100000
      00111198
    Contained_in_operon: CEOP1472
    Ortholog (40)
    Paralog: WBGene00003821 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00013001 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00016907 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00022054 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable GTP binding activity. Predicted to be located in nucleolus. Is an ortholog of human GNL2 (G protein nucleolar 2). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T19A6.2a
      T19A6.2b
    Corresponding_CDS_history: T19A6.2a:wp90
      T19A6.2b:wp90
      T19A6.2c:wp274
    Corresponding_transcript: T19A6.2a.1
      T19A6.2b.1
    Other_sequence (84)
    Associated_feature: WBsf984419
      WBsf984420
      WBsf1010227
      WBsf218150
  Experimental_info: RNAi_result: WBRNAi00077299 Inferred_automatically: RNAi_primary
      WBRNAi00026305 Inferred_automatically: RNAi_primary
      WBRNAi00116783 Inferred_automatically: RNAi_primary
      WBRNAi00035644 Inferred_automatically: RNAi_primary
      WBRNAi00004224 Inferred_automatically: RNAi_primary
      WBRNAi00053485 Inferred_automatically: RNAi_primary
      WBRNAi00001175 Inferred_automatically: RNAi_primary
      WBRNAi00077312 Inferred_automatically: RNAi_primary
    Expr_pattern: Chronogram2000
      Expr6709
      Expr1023236
      Expr1031645
      Expr1157050
      Expr2013993
      Expr2032233
    Drives_construct: WBCnstr00003641
      WBCnstr00036016
    Construct_product: WBCnstr00036016
    Microarray_results (35)
    Expression_cluster (146)
    Interaction (260)
  Map_info: Map: I Position: 2.78304 Error: 0.004428
    Positive: Positive_clone: T19A6 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00034327
    WBPaper00038491
    WBPaper00046133
    WBPaper00055090
    WBPaper00064339
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene