WormBase Tree Display for Gene: WBGene00003596
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| WBGene00003596 | Evidence | Author_evidence | Slack FJ | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | T19A6 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | ngp-1 | Person_evidence | WBPerson599 | |||||
| Sequence_name | T19A6.2 | ||||||||
| Molecular_name | T19A6.2a | ||||||||
| T19A6.2a.1 | |||||||||
| CE32493 | |||||||||
| T19A6.2b | |||||||||
| CE32494 | |||||||||
| T19A6.2b.1 | |||||||||
| Other_name | CELE_T19A6.2 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | ngp-1 | ||||||||
| DB_info | Database | AceView | gene | 1I973 | |||||
| WormQTL | gene | WBGene00003596 | |||||||
| WormFlux | gene | WBGene00003596 | |||||||
| NDB | locus_tag | CELE_T19A6.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00003596|UniProtKB=Q9XXN4 | |||||||
| family | PTHR11089 | ||||||||
| NCBI | gene | 172624 | |||||||
| RefSeq | protein | NM_059874.6 | |||||||
| NM_001392677.1 | |||||||||
| TREEFAM | TREEFAM_ID | TF105668 | |||||||
| TrEMBL | UniProtAcc | Q9U365 | |||||||
| Q9XXN4 | |||||||||
| UniProt_GCRP | UniProtAcc | Q9XXN4 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:32 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ngp | ||||||||
| Allele | WBVar00655052 | ||||||||
| WBVar00655053 | |||||||||
| WBVar00655054 | |||||||||
| WBVar00655055 | |||||||||
| WBVar00655056 | |||||||||
| WBVar00655057 | |||||||||
| WBVar00655058 | |||||||||
| WBVar00655059 | |||||||||
| WBVar00655060 | |||||||||
| WBVar00655061 | |||||||||
| WBVar00655062 | |||||||||
| WBVar00655063 | |||||||||
| WBVar00655064 | |||||||||
| WBVar00655065 | |||||||||
| WBVar00655066 | |||||||||
| WBVar00655067 | |||||||||
| WBVar00655068 | |||||||||
| WBVar01475796 | |||||||||
| WBVar00655069 | |||||||||
| WBVar00655070 | |||||||||
| WBVar00155044 | |||||||||
| WBVar00655071 | |||||||||
| WBVar00155045 | |||||||||
| WBVar01500105 | |||||||||
| WBVar01499739 | |||||||||
| WBVar01429527 | |||||||||
| WBVar01499786 | |||||||||
| WBVar01499054 | |||||||||
| WBVar00340071 | |||||||||
| WBVar00340072 | |||||||||
| WBVar00340073 | |||||||||
| WBVar00340074 | |||||||||
| WBVar00340075 | |||||||||
| WBVar00340076 | |||||||||
| WBVar00340077 | |||||||||
| WBVar00070694 | |||||||||
| WBVar01432302 | |||||||||
| WBVar01391896 | |||||||||
| WBVar00655044 | |||||||||
| WBVar00655045 | |||||||||
| WBVar00307512 | |||||||||
| WBVar00655046 | |||||||||
| WBVar00655047 | |||||||||
| WBVar01498959 | |||||||||
| WBVar00655048 | |||||||||
| WBVar00655049 | |||||||||
| WBVar00655050 | |||||||||
| WBVar00655051 | |||||||||
| Strain | WBStrain00003165 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00099996 | ||||||||
| 00099997 | |||||||||
| 00099998 | |||||||||
| 00099999 | |||||||||
| 00100000 | |||||||||
| 00111198 | |||||||||
| Contained_in_operon | CEOP1472 | ||||||||
| Ortholog (40) | |||||||||
| Paralog | WBGene00003821 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00013001 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00016907 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00022054 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable GTP binding activity. Predicted to be located in nucleolus. Is an ortholog of human GNL2 (G protein nucleolar 2). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T19A6.2a | |||||||
| T19A6.2b | |||||||||
| Corresponding_CDS_history | T19A6.2a:wp90 | ||||||||
| T19A6.2b:wp90 | |||||||||
| T19A6.2c:wp274 | |||||||||
| Corresponding_transcript | T19A6.2a.1 | ||||||||
| T19A6.2b.1 | |||||||||
| Other_sequence (84) | |||||||||
| Associated_feature | WBsf984419 | ||||||||
| WBsf984420 | |||||||||
| WBsf1010227 | |||||||||
| WBsf218150 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00077299 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00026305 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00116783 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00035644 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00004224 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00053485 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00001175 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00077312 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram2000 | ||||||||
| Expr6709 | |||||||||
| Expr1023236 | |||||||||
| Expr1031645 | |||||||||
| Expr1157050 | |||||||||
| Expr2013993 | |||||||||
| Expr2032233 | |||||||||
| Drives_construct | WBCnstr00003641 | ||||||||
| WBCnstr00036016 | |||||||||
| Construct_product | WBCnstr00036016 | ||||||||
| Microarray_results (35) | |||||||||
| Expression_cluster (146) | |||||||||
| Interaction (260) | |||||||||
| Map_info | Map | I | Position | 2.78304 | Error | 0.004428 | |||
| Positive | Positive_clone | T19A6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00034327 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00046133 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00064339 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
