WormBase Tree Display for Gene: WBGene00003578
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WBGene00003578 | SMap | S_parent | Sequence | T26E3 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | ndx-1 | Person_evidence | WBPerson3090 | |||||
Sequence_name | T26E3.2 | ||||||||
Molecular_name | T26E3.2 | ||||||||
T26E3.2.1 | |||||||||
CE14186 | |||||||||
Other_name | CELE_T26E3.2 | Accession_evidence | NDB | BX284601 | |||||
Public_name | ndx-1 | ||||||||
DB_info | Database (12) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:32 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | ndx | ||||||||
Allele (91) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00035400 | ||||||||
00035401 | |||||||||
00035402 | |||||||||
00035403 | |||||||||
00035404 | |||||||||
00035405 | |||||||||
Ortholog (36) | |||||||||
Paralog | WBGene00003586 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
Structured_description | Concise_description | The ndx-1 gene encodes a NUDIX hydrolase. | Paper_evidence | WBPaper00004210 | |||||
Curator_confirmed | WBPerson567 | ||||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Predicted to enable 8-oxo-GDP phosphatase activity; 8-oxo-dGDP phosphatase activity; and magnesium ion binding activity. Located in sarcoplasmic reticulum. Expressed in spermatheca and vulval muscle. Is an ortholog of human NUDT18 (nudix hydrolase 18). | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | T26E3.2 | |||||||
Corresponding_transcript | T26E3.2.1 | ||||||||
Other_sequence (30) | |||||||||
Associated_feature | WBsf716672 | ||||||||
WBsf985656 | |||||||||
WBsf1010946 | |||||||||
WBsf218626 | |||||||||
Experimental_info | RNAi_result | WBRNAi00092578 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00054197 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00092576 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00004308 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00035993 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00092575 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00092577 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00092579 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr4926 | ||||||||
Expr9417 | |||||||||
Expr1010462 | |||||||||
Expr1031631 | |||||||||
Expr1157743 | |||||||||
Expr2013942 | |||||||||
Expr2032181 | |||||||||
Drives_construct | WBCnstr00012339 | ||||||||
Construct_product | WBCnstr00013982 | ||||||||
Microarray_results (19) | |||||||||
Expression_cluster (133) | |||||||||
Interaction | WBInteraction000029594 | ||||||||
WBInteraction000148094 | |||||||||
WBInteraction000204182 | |||||||||
WBInteraction000245126 | |||||||||
WBInteraction000313529 | |||||||||
WBInteraction000441072 | |||||||||
WBInteraction000544142 | |||||||||
WBInteraction000548271 | |||||||||
Map_info | Map | I | Position | 13.9018 | Error | 0.003532 | |||
Positive | Positive_clone | T26E3 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Mapping_data | Multi_point | 4967 | |||||||
Pseudo_map_position | |||||||||
Reference (11) | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |