WormBase Tree Display for Gene: WBGene00003366
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| WBGene00003366 | Evidence | Paper_evidence | WBPaper00005932 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | E01F3 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | mir-273 | Person_evidence | WBPerson18 | |||||
| Sequence_name | E01F3.2 | ||||||||
| Molecular_name | E01F3.2 | ||||||||
| E01F3.2b | |||||||||
| Other_name | cel-mir-273 | Remark | miRBase V21 import | ||||||
| CELE_E01F3.2 | Accession_evidence | NDB | BX284602 | ||||||
| Public_name | mir-273 | ||||||||
| DB_info | Database | miRBase | acc | MI0000353 | |||||
| SignaLink | mirna | cel-mir-273 | |||||||
| NDB | locus_tag | CELE_E01F3.2 | |||||||
| NCBI | gene | 3565055 | |||||||
| RefSeq | protein | NR_002359.2 | |||||||
| RNAcentral | URSid | URS0000028A0F | |||||||
| URS000062248B | |||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:31 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001265 | |||||||
| Gene_class | mir | ||||||||
| Allele | WBVar01499702 | ||||||||
| WBVar00251183 | |||||||||
| WBVar00090839 | |||||||||
| WBVar01498435 | |||||||||
| WBVar00019773 | |||||||||
| WBVar00557512 | |||||||||
| WBVar02131247 | |||||||||
| WBVar01498941 | |||||||||
| WBVar01499314 | |||||||||
| Strain | WBStrain00027453 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00106262 | ||||||||
| 00106263 | |||||||||
| 00106264 | |||||||||
| 00106265 | |||||||||
| 00106266 | |||||||||
| Structured_description | Concise_description | mir-273 encodes a microRNA, a small non-protein coding RNA; miR-273 is involved in the pathway for functional lateralization of the chemosensory ASE neuron; miR-273 regulates the spatial expression of another miRNA, lsy-6, repressing lsy-6 expression in the ASER neuron; this regulation is mediated by the DIE-1 zinc-finger transcription factor; mir-273 is expressed in several bilaterally symmetric pairs of head neurons, including ASE neurons, with expression in ASER being significantly higher than ASEL. | Paper_evidence | WBPaper00005932 | |||||
| WBPaper00024291 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| WBPerson324 | |||||||||
| Date_last_updated | 27 Aug 2007 00:00:00 | ||||||||
| Automated_description | Enables mRNA regulatory element binding translation repressor activity. Involved in asymmetric protein localization involved in cell fate determination; miRNA-mediated post-transcriptional gene silencing; and neuroblast fate determination. Expressed in ASEL and ASER. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_transcript | E01F3.2 | |||||||
| E01F3.2b | |||||||||
| Experimental_info | Expr_pattern | Expr4409 | |||||||
| Drives_construct | WBCnstr00006607 | ||||||||
| WBCnstr00011974 | |||||||||
| Expression_cluster | WBPaper00028344:adult_expr_change | ||||||||
| WBPaper00062103:neuron_enriched | |||||||||
| Interaction | WBInteraction000502183 | ||||||||
| Map_info | Map | II | Position | 23.7723 | Error | 0.010703 | |||
| Positive | Positive_clone | E01F3 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference (22) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
