WormBase Tree Display for Gene: WBGene00003261
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| WBGene00003261 | Evidence | Paper_evidence | WBPaper00004928 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| WBPaper00005879 | |||||||||
| WBPaper00004927 | |||||||||
| SMap | S_parent | Sequence | M04C9 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | mir-2 | Person_evidence | WBPerson18 | |||||
| Sequence_name | M04C9.7 | ||||||||
| Molecular_name | M04C9.7 | ||||||||
| M04C9.7a | |||||||||
| M04C9.7b | |||||||||
| Other_name | cel-mir-2 | Remark | miRBase V21 import | ||||||
| Cel-Mir-2-o10 | Remark | MirGeneDB 2.1 import | |||||||
| CELE_M04C9.7 | Accession_evidence | NDB | BX284601 | ||||||
| Public_name | mir-2 | ||||||||
| DB_info | Database | miRBase | acc | MI0000004 | |||||
| SignaLink | mirna | cel-mir-2 | |||||||
| MirGeneDB | cel | Cel-Mir-2-o10 | |||||||
| NDB | locus_tag | CELE_M04C9.7 | |||||||
| NCBI | gene | 259959 | |||||||
| RefSeq | protein | NR_000171.2 | |||||||
| RNAcentral | URSid | URS0000099C58 | |||||||
| URS00003594EB | |||||||||
| URS000051D980 | |||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:31 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001265 | |||||||
| Gene_class | mir | ||||||||
| Allele | WBVar01499161 | ||||||||
| WBVar00145666 | |||||||||
| WBVar01500105 | |||||||||
| WBVar01499739 | |||||||||
| WBVar01499786 | |||||||||
| WBVar00660481 | |||||||||
| WBVar01499054 | |||||||||
| WBVar00090796 | |||||||||
| WBVar01498959 | |||||||||
| Strain | WBStrain00027448 | ||||||||
| WBStrain00027583 | |||||||||
| WBStrain00035819 | |||||||||
| WBStrain00040238 | |||||||||
| In_cluster | MIR-2 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00106219 | ||||||||
| 00106220 | |||||||||
| 00106221 | |||||||||
| Structured_description | Concise_description | mir-2 encodes a microRNA, a small non-protein coding RNA; many of the known microRNAs are involved in post-transcriptional regulation of genes; mir-2 is conserved in C. briggsae as well as in Drosophila; miR-2 is expressed at all life stages and most abundantly in the L1 larval stage. | Paper_evidence | WBPaper00004927 | |||||
| WBPaper00004928 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| WBPerson324 | |||||||||
| Date_last_updated | 05 Aug 2015 00:00:00 | ||||||||
| Automated_description | Predicted to enable mRNA base-pairing translational repressor activity. Predicted to be involved in regulatory ncRNA-mediated post-transcriptional gene silencing. Predicted to be part of RISC complex. Expressed in neurons. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_transcript | M04C9.7 | |||||||
| M04C9.7a | |||||||||
| M04C9.7b | |||||||||
| Other_sequence | AJ487557 | ||||||||
| Associated_feature | WBsf979092 | ||||||||
| Experimental_info | Expr_pattern | Expr2478 | |||||||
| Expr8412 | |||||||||
| Expr13543 | |||||||||
| Drives_construct | WBCnstr00005531 | ||||||||
| Construct_product | WBCnstr00042828 | ||||||||
| WBCnstr00042829 | |||||||||
| Regulate_expr_cluster | WBPaper00064080:miR-2_miRNA_interacting | ||||||||
| Expression_cluster (21) | |||||||||
| Interaction | WBInteraction000504652 | ||||||||
| WBInteraction000541200 | |||||||||
| Map_info | Map | I | Position | 3.75601 | Error | 0.000667 | |||
| Positive | Positive_clone | M04C9 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference (16) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
