WormBase Tree Display for Gene: WBGene00003249
expand all nodes | collapse all nodes | view schema
WBGene00003249 | SMap | S_parent | Sequence | F11F1 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | mig-18 | Paper_evidence | WBPaper00044520 | |||
Person_evidence | WBPerson261 | ||||||
Sequence_name | F11F1.6 | ||||||
Molecular_name | F11F1.6 | ||||||
F11F1.6.1 | |||||||
CE33613 | |||||||
Other_name | CELE_F11F1.6 | Accession_evidence | NDB | BX284603 | |||
Public_name | mig-18 | ||||||
DB_info | Database | WormFlux | gene | WBGene00003249 | |||
NDB | locus_tag | CELE_F11F1.6 | |||||
Panther | gene | CAEEL|WormBase=WBGene00003249|UniProtKB=O45348 | |||||
family | PTHR35572 | ||||||
NCBI | gene | 184362 | |||||
RefSeq | protein | NM_067365.5 | |||||
SwissProt | UniProtAcc | O45348 | |||||
TREEFAM | TREEFAM_ID | TF316692 | |||||
UniProt_GCRP | UniProtAcc | O45348 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Acquires_merge | WBGene00008718 | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | mig | ||||||
Allele (24) | |||||||
Legacy_information | [Nishiwaki K ] DTC migration abnormal | ||||||
Strain | WBStrain00028695 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00034304 | ||||||
00034305 | |||||||
00034306 | |||||||
Ortholog (27) | |||||||
Paralog | WBGene00013884 | Caenorhabditis elegans | From_analysis | Panther | |||
WBGene00011694 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00012940 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00009626 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00012545 | Caenorhabditis elegans | From_analysis | Panther | ||||
Structured_description | Automated_description | Predicted to be located in basement membrane and extracellular region. Expressed in body wall musculature; gonad; and pharyngeal muscle cell. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F11F1.6 | |||||
Corresponding_CDS_history | F11F1.6:wp98 | ||||||
Corresponding_transcript | F11F1.6.1 | ||||||
Other_sequence | TCC00771_1 | ||||||
DI00355 | |||||||
DIC00685_1 | |||||||
Associated_feature | WBsf645710 | ||||||
WBsf659724 | |||||||
WBsf659725 | |||||||
WBsf994879 | |||||||
WBsf1016367 | |||||||
WBsf226002 | |||||||
WBsf226003 | |||||||
Experimental_info | RNAi_result | WBRNAi00030833 | Inferred_automatically | RNAi_primary | |||
WBRNAi00006310 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00044402 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00013142 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr11389 | ||||||
Expr13587 | |||||||
Expr1011982 | |||||||
Expr1033796 | |||||||
Expr1148349 | |||||||
Expr2013565 | |||||||
Expr2031798 | |||||||
Drives_construct | WBCnstr00018815 | ||||||
WBCnstr00036161 | |||||||
Construct_product | WBCnstr00018815 | ||||||
WBCnstr00036161 | |||||||
Microarray_results (17) | |||||||
Expression_cluster (126) | |||||||
Interaction | WBInteraction000000899 | ||||||
WBInteraction000520829 | |||||||
WBInteraction000565265 | |||||||
Map_info | Map | III | Position | 21.2131 | |||
Positive | Positive_clone | F11F1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Mapping_data | Multi_point | 3449 | |||||
Reference | WBPaper00003598 | ||||||
WBPaper00016918 | |||||||
WBPaper00018154 | |||||||
WBPaper00022593 | |||||||
WBPaper00028665 | |||||||
WBPaper00033528 | |||||||
WBPaper00044520 | |||||||
WBPaper00049351 | |||||||
Remark | [140424 pad] Modified Map position as it was a reverse physical that could not be fixed by automated methods. (21.5) | ||||||
Method | Gene |