WormBase Tree Display for Gene: WBGene00003235
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WBGene00003235 | SMap | S_parent | Sequence | C52E4 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | mif | ||||||
Allele (32) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00062267 | ||||||
00062268 | |||||||
00062269 | |||||||
00062270 | |||||||
Contained_in_operon | CEOP5308 | ||||||
Ortholog (31) | |||||||
Paralog | WBGene00003234 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | |||||||
WBGene00003236 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00003237 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
Structured_description | Automated_description | Predicted to enable cytokine activity and phenylpyruvate tautomerase activity. Predicted to be involved in signal transduction. Predicted to be located in extracellular space. Expressed in body wall musculature; hypodermis; and vulval muscle. Is an ortholog of human DDT (D-dopachrome tautomerase) and DDTL (D-dopachrome tautomerase like). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | C52E4.2a | |||||
C52E4.2b | |||||||
C52E4.2c | |||||||
Corresponding_transcript | C52E4.2a.1 | ||||||
C52E4.2a.2 | |||||||
C52E4.2b.1 | |||||||
C52E4.2c.1 | |||||||
Other_sequence (17) | |||||||
Associated_feature | WBsf653170 | ||||||
WBsf234599 | |||||||
Experimental_info | RNAi_result | WBRNAi00012323 | Inferred_automatically | RNAi_primary | |||
WBRNAi00043047 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00092922 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00064530 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1726 | ||||||
Expr1728 | |||||||
Expr1733 | |||||||
Expr1019184 | |||||||
Expr1031531 | |||||||
Expr1147008 | |||||||
Expr2013557 | |||||||
Expr2031790 | |||||||
Drives_construct | WBCnstr00000533 | ||||||
WBCnstr00010420 | |||||||
WBCnstr00036170 | |||||||
Construct_product | WBCnstr00010420 | ||||||
WBCnstr00036170 | |||||||
Antibody | WBAntibody00002461 | ||||||
Microarray_results (21) | |||||||
Expression_cluster (133) | |||||||
Interaction (15) | |||||||
Map_info | Map | V | Position | 3.55101 | Error | 0.00145 | |
Positive | Positive_clone | C52E4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Mapping_data | Multi_point | 4951 | |||||
Pseudo_map_position | |||||||
Reference | WBPaper00005003 | ||||||
WBPaper00032062 | |||||||
WBPaper00038491 | |||||||
WBPaper00049828 | |||||||
WBPaper00055090 | |||||||
WBPaper00063976 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |