WormBase Tree Display for Gene: WBGene00003179
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| WBGene00003179 | SMap | S_parent | Sequence | C52B9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | mec-18 | Person_evidence | WBPerson95 | |||||
| Sequence_name | C52B9.9 | ||||||||
| Molecular_name | C52B9.9 | ||||||||
| C52B9.9.1 | |||||||||
| CE16940 | |||||||||
| Other_name | acs-8 | Person_evidence | WBPerson237 | ||||||
| WBPerson2239 | |||||||||
| CELE_C52B9.9 | Accession_evidence | NDB | BX284606 | ||||||
| Public_name | mec-18 | ||||||||
| DB_info | Database | AceView | gene | XE890 | |||||
| WormQTL | gene | WBGene00003179 | |||||||
| WormFlux | gene | WBGene00003179 | |||||||
| NDB | locus_tag | CELE_C52B9.9 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00003179|UniProtKB=O45873 | |||||||
| family | PTHR24096 | ||||||||
| NCBI | gene | 180701 | |||||||
| RefSeq | protein | NM_076330.8 | |||||||
| TREEFAM | TREEFAM_ID | TF313958 | |||||||
| TrEMBL | UniProtAcc | O45873 | |||||||
| UniProt_GCRP | UniProtAcc | O45873 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:31 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 11 Sep 2008 09:57:25 | WBPerson2970 | Name_change | Other_name | acs-18 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | mec | ||||||||
| Allele (52) | |||||||||
| Legacy_information | [C.elegansII] u228 : touch insensitive, lethargic.OA5: u69, u138, u182 etc. [Chalfie and Au 1989; Huang and Chalfie 1994; TU] | ||||||||
| Strain | WBStrain00035050 | ||||||||
| WBStrain00035036 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (15) | |||||||||
| Ortholog (38) | |||||||||
| Paralog (17) | |||||||||
| Structured_description | Concise_description | mec-18 encodes a protein similar to firefly luciferase and plant protein 4-coumarate coA ligase; mec-18 is involved in sensory mechanotransduction; genetic interactions with other mec genes suggest that mec-18 may be involved in negative regulation of the degenerin channel in the touch receptor neurons; mec-18 is expressed exclusively in the touch cells. | Paper_evidence | WBPaper00001871 | |||||
| WBPaper00005666 | |||||||||
| Curator_confirmed | WBPerson324 | ||||||||
| Date_last_updated | 12 Jun 2007 00:00:00 | ||||||||
| Automated_description | Predicted to enable CoA-ligase activity. Involved in detection of mechanical stimulus involved in sensory perception of touch and mechanosensory behavior. Located in neuron projection and neuronal cell body. Expressed in PLML; PLMR; and touch receptor neurons. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C52B9.9 | |||||||
| Corresponding_CDS_history | C52B9.9:wp108 | ||||||||
| Corresponding_transcript | C52B9.9.1 | ||||||||
| Other_sequence | Oden_isotig26687 | ||||||||
| CJC09203_1 | |||||||||
| JI226556.1 | |||||||||
| Dviv_isotig32007 | |||||||||
| Associated_feature | WBsf237269 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00030076 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00012300 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00043019 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr269 | ||||||||
| Expr11123 | |||||||||
| Expr1023167 | |||||||||
| Expr1146983 | |||||||||
| Expr1170085 | |||||||||
| Expr2013493 | |||||||||
| Expr2031727 | |||||||||
| Drives_construct (12) | |||||||||
| Construct_product | WBCnstr00016622 | ||||||||
| WBCnstr00036192 | |||||||||
| Antibody | WBAntibody00002613 | ||||||||
| WBAntibody00002621 | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (114) | |||||||||
| Interaction (23) | |||||||||
| Map_info | Map | X | Position | -7.80366 | Error | 0.004168 | |||
| Well_ordered | |||||||||
| Positive | Positive_clone | C52B9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 3626 | |||||||
| 4413 | |||||||||
| 5588 | |||||||||
| Reference (31) | |||||||||
| Method | Gene |
