WormBase Tree Display for Gene: WBGene00003157
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| WBGene00003157 | Evidence | CGC_data_submission | |||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | R10E4 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | mcm-5 | Person_evidence | WBPerson1160 | |||||
| Sequence_name | R10E4.4 | ||||||||
| Molecular_name | R10E4.4 | ||||||||
| R10E4.4.1 | |||||||||
| CE03558 | |||||||||
| Other_name | CELE_R10E4.4 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | mcm-5 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:30 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | mcm | ||||||||
| Allele (35) | |||||||||
| Strain | WBStrain00047632 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (29) | |||||||||
| Contained_in_operon | CEOP3898 | ||||||||
| Ortholog (38) | |||||||||
| Paralog | WBGene00003154 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00003155 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00003156 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00003158 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00003159 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable single-stranded DNA binding activity. Predicted to contribute to 3'-5' DNA helicase activity and single-stranded DNA helicase activity. Predicted to be involved in DNA replication initiation and double-strand break repair via break-induced replication. Predicted to be located in nucleus. Predicted to be part of MCM complex. Human ortholog(s) of this gene implicated in Meier-Gorlin syndrome 8. Is an ortholog of human MCM5 (minichromosome maintenance complex component 5). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0080255 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:6948) | ||||
| Molecular_info | Corresponding_CDS | R10E4.4 | |||||||
| Corresponding_transcript | R10E4.4.1 | ||||||||
| Other_sequence | XI02904 | ||||||||
| MAC00581_1 | |||||||||
| Tcol_isotig08818 | |||||||||
| CRC00963_1 | |||||||||
| MAC03031_1 | |||||||||
| MA01268 | |||||||||
| Acan_isotig08160 | |||||||||
| JI165900.1 | |||||||||
| Tcir_isotig12724 | |||||||||
| Oden_isotig10455 | |||||||||
| JI469150.1 | |||||||||
| RSC04357_1 | |||||||||
| MA03064 | |||||||||
| CJC01162_1 | |||||||||
| MPC00909_2 | |||||||||
| Hbac_isotig02097 | |||||||||
| CBC00855_1 | |||||||||
| JI478334.1 | |||||||||
| HBC00605_1 | |||||||||
| HBC03220_1 | |||||||||
| JI476270.1 | |||||||||
| AS02528 | |||||||||
| Tcol_isotig12800 | |||||||||
| ACC01702_1 | |||||||||
| CR01931 | |||||||||
| DI01723 | |||||||||
| MP00524 | |||||||||
| EX545395.1 | |||||||||
| JI473601.1 | |||||||||
| ACC23264_1 | |||||||||
| JI470549.1 | |||||||||
| EX555382.1 | |||||||||
| PPC00295_1 | |||||||||
| Oden_isotig10454 | |||||||||
| EW741268.1 | |||||||||
| EX559292.1 | |||||||||
| FF678630.1 | |||||||||
| FF678886.1 | |||||||||
| FD516637.1 | |||||||||
| JI463599.1 | |||||||||
| JI464952.1 | |||||||||
| EX541318.1 | |||||||||
| XIC02201_1 | |||||||||
| JI466989.1 | |||||||||
| Dviv_isotig23547 | |||||||||
| MPC00909_1 | |||||||||
| Tcol_isotig18889 | |||||||||
| RS09029 | |||||||||
| MP00590 | |||||||||
| ES410700.1 | |||||||||
| CSC01177_1 | |||||||||
| DIC01390_1 | |||||||||
| Oden_isotig10456 | |||||||||
| CJC03254_1 | |||||||||
| CR00300 | |||||||||
| CJC12908_1 | |||||||||
| Tcir_isotig07129 | |||||||||
| ACC07354_1 | |||||||||
| Oden_isotig10457 | |||||||||
| ASC24884_1 | |||||||||
| EW741780.1 | |||||||||
| HBC12132_1 | |||||||||
| EX556920.1 | |||||||||
| PP00342 | |||||||||
| Associated_feature | WBsf650967 | ||||||||
| WBsf666774 | |||||||||
| WBsf666775 | |||||||||
| WBsf976095 | |||||||||
| WBsf976096 | |||||||||
| WBsf992083 | |||||||||
| WBsf226510 | |||||||||
| WBsf226511 | |||||||||
| WBsf226512 | |||||||||
| Experimental_info | RNAi_result (25) | ||||||||
| Expr_pattern | Expr1025677 | ||||||||
| Expr1031492 | |||||||||
| Expr1155381 | |||||||||
| Expr2013452 | |||||||||
| Expr2031686 | |||||||||
| Drives_construct | WBCnstr00036212 | ||||||||
| Construct_product | WBCnstr00036212 | ||||||||
| Antibody | WBAntibody00002986 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (200) | |||||||||
| Interaction (173) | |||||||||
| Map_info | Map | III | Position | -3.23466 | Error | 0.006456 | |||
| Positive | Positive_clone | R10E4 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference (12) | |||||||||
| Remark | Sequence connection from [Kim SK] | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
