WormBase Tree Display for Gene: WBGene00003107
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WBGene00003107 | SMap | S_parent | Sequence | R166 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | mab-10 | Person_evidence | WBPerson3439 | |||||
WBPerson268 | |||||||||
WBPerson261 | |||||||||
Sequence_name | R166.1 | ||||||||
Molecular_name | R166.1a | ||||||||
R166.1a.1 | |||||||||
CE43283 | |||||||||
R166.1a.2 | |||||||||
R166.1b | |||||||||
Other_name | CELE_R166.1 | Accession_evidence | NDB | BX284602 | |||||
Public_name | mab-10 | ||||||||
DB_info | Database | AceView | gene | 2K821 | |||||
WormQTL | gene | WBGene00003107 | |||||||
WormFlux | gene | WBGene00003107 | |||||||
NDB | locus_tag | CELE_R166.1 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00003107|UniProtKB=Q22002 | |||||||
family | PTHR12623 | ||||||||
NCBI | gene | 187916 | |||||||
RefSeq | protein | NM_063867.3 | |||||||
NR_138506.1 | |||||||||
SwissProt | UniProtAcc | Q22002 | |||||||
UniProt_GCRP | UniProtAcc | Q22002 | |||||||
RNAcentral | URSid | URS0000A72B60 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:30 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
2 | 16 Jul 2007 08:40:06 | WBPerson2970 | Event | Acquires_merge | WBGene00011301 | ||||
Acquires_merge | WBGene00011301 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | mab | ||||||||
Reference_allele | WBVar00143858 | ||||||||
Allele (119) | |||||||||
Legacy_information | e1248 : adult male has slightly swollen bursa reduced fan thin rays; some adult males have supernumerary molt. ES2 ME0. Hermaphrodite has slightly protruding vulva ES2. NA1. | ||||||||
See also e1235, e1248 | |||||||||
[C.elegansII] e1248 : adult male has slightly swollen bursa, reduced fan, thin rays; some adult males have supernumerary molt, second adult cuticle. e1248/Df more severe. ES2 ME0. Hermaphrodite has slightly protruding vulva. ES2. NA1. [Hodgkin 1983a; Link et al. 1988; CB; CL] | |||||||||
Strain | WBStrain00004492 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (18) | |||||||||
Ortholog (38) | |||||||||
Structured_description | Automated_description | Enables DNA-binding transcription factor binding activity and transcription coregulator activity. Involved in several processes, including exit from mitosis; regulation of development, heterochronic; and regulation of vulval development. Located in nucleus. Expressed in several structures, including gonad; hypodermis; pharynx; somatic nervous system; and vulval cell. Is an ortholog of human NAB1 (NGFI-A binding protein 1). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | R166.1a | |||||||
Corresponding_transcript | R166.1b | ||||||||
R166.1a.1 | |||||||||
R166.1a.2 | |||||||||
Other_sequence | FC820380.1 | ||||||||
SRC05945_1 | |||||||||
FC819997.1 | |||||||||
JI167243.1 | |||||||||
JI469571.1 | |||||||||
ACC10272_1 | |||||||||
SR03237 | |||||||||
EX550854.1 | |||||||||
Associated_feature | WBsf989371 | ||||||||
WBsf989372 | |||||||||
WBsf989373 | |||||||||
WBsf989374 | |||||||||
WBsf989375 | |||||||||
WBsf1013034 | |||||||||
WBsf1013035 | |||||||||
WBsf1013036 | |||||||||
WBsf1013037 | |||||||||
WBsf1013038 | |||||||||
Experimental_info | RNAi_result | WBRNAi00017883 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00034946 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00051997 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr9660 | ||||||||
Expr9661 | |||||||||
Expr14647 | |||||||||
Expr1014146 | |||||||||
Expr1031469 | |||||||||
Expr1155639 | |||||||||
Expr2013322 | |||||||||
Expr2031554 | |||||||||
Drives_construct | WBCnstr00009532 | ||||||||
WBCnstr00014208 | |||||||||
WBCnstr00016068 | |||||||||
WBCnstr00036226 | |||||||||
Construct_product | WBCnstr00009532 | ||||||||
WBCnstr00014208 | |||||||||
WBCnstr00016068 | |||||||||
WBCnstr00036226 | |||||||||
Microarray_results (20) | |||||||||
Expression_cluster (118) | |||||||||
Interaction (18) | |||||||||
Map_info | Map | II | Position | 3.07397 | Error | 0.020491 | |||
Positive | Positive_clone | R166 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Mapping_data | Multi_point | 1392 | |||||||
1393 | |||||||||
1394 | |||||||||
1395 | |||||||||
Pos_neg_data | 3356 | ||||||||
3671 | |||||||||
3674 | |||||||||
3788 | |||||||||
3789 | |||||||||
3790 | |||||||||
Reference (19) | |||||||||
Method | Gene |