WormBase Tree Display for Gene: WBGene00003066
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| WBGene00003066 | Evidence | CGC_data_submission | |||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | ZC410 | ||||||
| Identity | Version | 2 | |||||||
| Name | CGC_name | lpl-1 | Person_evidence | WBPerson320 | |||||
| Sequence_name | ZC410.7 | ||||||||
| Molecular_name | ZC410.7 | ||||||||
| ZC410.7.1 | |||||||||
| CE51859 | |||||||||
| Other_name | Ny | ||||||||
| CELE_ZC410.7 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | lpl-1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:30 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 06 Mar 2018 14:38:13 | WBPerson4025 | Event | Split_into | WBGene00303009 | ||||
| Split_into | WBGene00303009 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | lpl | ||||||||
| Allele (31) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (14) | |||||||||
| Contained_in_operon | CEOP4324 | ||||||||
| CEOP5615 | |||||||||
| Ortholog (36) | |||||||||
| Paralog | WBGene00303009 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Structured_description | Concise_description | The lpl-1 gene encodes a lipoate ligase homolog; this gene resides in an operon that also contains the genes icl-1 and C01F6.9. | Paper_evidence | WBPaper00005113 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable lipoyl(octanoyl) transferase activity. Predicted to be involved in organic substance metabolic process and primary metabolic process. Predicted to be located in mitochondrion. Is an ortholog of human LIPT2 (lipoyl(octanoyl) transferase 2). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | ZC410.7 | |||||||
| Corresponding_CDS_history | ZC410.7:wp42 | ||||||||
| ZC410.7a:wp264 | |||||||||
| ZC410.7b:wp190 | |||||||||
| ZC410.7b:wp264 | |||||||||
| ZC410.7c:wp190 | |||||||||
| Corresponding_transcript | ZC410.7.1 | ||||||||
| Corresponding_transcript_history | ZC410.7b:wp257 | ||||||||
| ZC410.7c:wp257 | |||||||||
| Other_sequence (13) | |||||||||
| Associated_feature | WBsf668138 | ||||||||
| WBsf230509 | |||||||||
| WBsf230510 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00038046 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00027012 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00001722 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00088542 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00071436 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00058897 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00009441 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1011011 | ||||||||
| Expr1031444 | |||||||||
| Expr1162333 | |||||||||
| Expr2013258 | |||||||||
| Expr2031489 | |||||||||
| Microarray_results (26) | |||||||||
| Expression_cluster (92) | |||||||||
| Interaction (42) | |||||||||
| Map_info | Map | IV | Position | 4.03579 | |||||
| Positive | Positive_clone | ZC410 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00060146 | |||||||||
| WBPaper00062388 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
