WormBase Tree Display for Gene: WBGene00003021
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| WBGene00003021 | SMap | S_parent | Sequence | F44B9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | lin-36 | Person_evidence | WBPerson261 | |||||
| Sequence_name | F44B9.6 | ||||||||
| Molecular_name | F44B9.6 | ||||||||
| F44B9.6.1 | |||||||||
| CE30992 | |||||||||
| Other_name | CELE_F44B9.6 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | lin-36 | ||||||||
| DB_info | Database | AceView | gene | 3J106 | |||||
| WormQTL | gene | WBGene00003021 | |||||||
| WormFlux | gene | WBGene00003021 | |||||||
| NDB | locus_tag | CELE_F44B9.6 | |||||||
| NCBI | gene | 176128 | |||||||
| RefSeq | protein | NM_066346.7 | |||||||
| SwissProt | UniProtAcc | P34427 | |||||||
| TREEFAM | TREEFAM_ID | TF319804 | |||||||
| UniProt_GCRP | UniProtAcc | P34427 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:30 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | lin | ||||||||
| Allele (78) | |||||||||
| Legacy_information | n766 : wildtype alone Muv in homozygotes with lin-8 lin-38 or lin-15(n767). ES2 ME3. NA4 (n772 (similar phenotype) etc.). | ||||||||
| See also n750, n766, n772 | |||||||||
| [C.elegansII] n766 : wildtype alone, Muv in homozygotes with lin-8, lin-38 or lin-15(n767). Mosaic analysis indicates autonomous action in VPC. ES2. ME3. OA3: n772 (similar), n750 etc. Cloned: encodes predicted 926 aa novel protein. [Ferguson and Horvitz 1989; MT; PS] | |||||||||
| Strain | WBStrain00026879 | ||||||||
| WBStrain00026897 | |||||||||
| WBStrain00027237 | |||||||||
| WBStrain00027246 | |||||||||
| WBStrain00027359 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00042268 | ||||||||
| 00042269 | |||||||||
| 00042270 | |||||||||
| 00042271 | |||||||||
| 00042272 | |||||||||
| 00042273 | |||||||||
| Contained_in_operon | CEOP3468 | ||||||||
| Ortholog (23) | |||||||||
| Structured_description | Automated_description | Predicted to enable DNA binding activity and metal ion binding activity. Involved in embryonic digestive tract morphogenesis. Predicted to be located in nucleus. Expressed in several structures, including P3.pa; P5.ppp; P7.paa; neurons; and vulval cell. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F44B9.6 | |||||||
| Corresponding_transcript | F44B9.6.1 | ||||||||
| Other_sequence (19) | |||||||||
| Associated_feature | WBsf651237 | ||||||||
| WBsf667123 | |||||||||
| WBsf667124 | |||||||||
| WBsf667125 | |||||||||
| WBsf667126 | |||||||||
| WBsf993219 | |||||||||
| WBsf227067 | |||||||||
| WBsf227068 | |||||||||
| WBsf227069 | |||||||||
| Transcription_factor | WBTranscriptionFactor000554 | ||||||||
| Experimental_info | RNAi_result (21) | ||||||||
| Expr_pattern | Expr1154 | ||||||||
| Expr1021965 | |||||||||
| Expr1031412 | |||||||||
| Expr1151109 | |||||||||
| Expr2013178 | |||||||||
| Expr2031410 | |||||||||
| Drives_construct | WBCnstr00000282 | ||||||||
| WBCnstr00001272 | |||||||||
| WBCnstr00036280 | |||||||||
| Construct_product | WBCnstr00036280 | ||||||||
| Regulate_expr_cluster | WBPaper00062056:lin-36(n766)_downregulated | ||||||||
| WBPaper00062056:lin-36(n766)_upregulated | |||||||||
| WBPaper00062056:lin-36(we31)_downregulated | |||||||||
| WBPaper00062056:lin-36(we31)_upregulated | |||||||||
| WBPaper00062056:lin-36(we36)_downregulated | |||||||||
| WBPaper00062056:lin-36(we36)_upregulated | |||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (137) | |||||||||
| Interaction (247) | |||||||||
| Map_info | Map | III | Position | -0.446585 | Error | 0.003437 | |||
| Well_ordered | |||||||||
| Positive | Positive_clone | E02E3 | |||||||
| F44B9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||||
| Mapping_data | Multi_point | 874 | |||||||
| 875 | |||||||||
| 876 | |||||||||
| 877 | |||||||||
| 878 | |||||||||
| 1098 | |||||||||
| 1105 | |||||||||
| 1107 | |||||||||
| 1886 | |||||||||
| 4220 | |||||||||
| Pos_neg_data | 4346 | ||||||||
| Reference (68) | |||||||||
| Method | Gene |
