WormBase Tree Display for Gene: WBGene00003021
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WBGene00003021 | SMap | S_parent | Sequence | F44B9 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | lin-36 | Person_evidence | WBPerson261 | |||||
Sequence_name | F44B9.6 | ||||||||
Molecular_name | F44B9.6 | ||||||||
F44B9.6.1 | |||||||||
CE30992 | |||||||||
Other_name | CELE_F44B9.6 | Accession_evidence | NDB | BX284603 | |||||
Public_name | lin-36 | ||||||||
DB_info | Database | AceView | gene | 3J106 | |||||
WormQTL | gene | WBGene00003021 | |||||||
WormFlux | gene | WBGene00003021 | |||||||
NDB | locus_tag | CELE_F44B9.6 | |||||||
NCBI | gene | 176128 | |||||||
RefSeq | protein | NM_066346.7 | |||||||
SwissProt | UniProtAcc | P34427 | |||||||
TREEFAM | TREEFAM_ID | TF319804 | |||||||
UniProt_GCRP | UniProtAcc | P34427 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:30 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | lin | ||||||||
Allele (78) | |||||||||
Legacy_information | n766 : wildtype alone Muv in homozygotes with lin-8 lin-38 or lin-15(n767). ES2 ME3. NA4 (n772 (similar phenotype) etc.). | ||||||||
See also n750, n766, n772 | |||||||||
[C.elegansII] n766 : wildtype alone, Muv in homozygotes with lin-8, lin-38 or lin-15(n767). Mosaic analysis indicates autonomous action in VPC. ES2. ME3. OA3: n772 (similar), n750 etc. Cloned: encodes predicted 926 aa novel protein. [Ferguson and Horvitz 1989; MT; PS] | |||||||||
Strain | WBStrain00026879 | ||||||||
WBStrain00026897 | |||||||||
WBStrain00027237 | |||||||||
WBStrain00027246 | |||||||||
WBStrain00027359 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (6) | |||||||||
Contained_in_operon | CEOP3468 | ||||||||
Ortholog (23) | |||||||||
Structured_description | Automated_description | Predicted to enable DNA binding activity and metal ion binding activity. Involved in embryonic digestive tract morphogenesis. Predicted to be located in nucleus. Expressed in several structures, including P3.pa; P5.ppp; P7.paa; neurons; and vulval cell. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F44B9.6 | |||||||
Corresponding_transcript | F44B9.6.1 | ||||||||
Other_sequence (19) | |||||||||
Associated_feature | WBsf651237 | ||||||||
WBsf667123 | |||||||||
WBsf667124 | |||||||||
WBsf667125 | |||||||||
WBsf667126 | |||||||||
WBsf993219 | |||||||||
WBsf227067 | |||||||||
WBsf227068 | |||||||||
WBsf227069 | |||||||||
Transcription_factor | WBTranscriptionFactor000554 | ||||||||
Experimental_info | RNAi_result (21) | ||||||||
Expr_pattern | Expr1154 | ||||||||
Expr1021965 | |||||||||
Expr1031412 | |||||||||
Expr1151109 | |||||||||
Expr2013178 | |||||||||
Expr2031410 | |||||||||
Drives_construct | WBCnstr00000282 | ||||||||
WBCnstr00001272 | |||||||||
WBCnstr00036280 | |||||||||
Construct_product | WBCnstr00036280 | ||||||||
Regulate_expr_cluster | WBPaper00062056:lin-36(n766)_downregulated | ||||||||
WBPaper00062056:lin-36(n766)_upregulated | |||||||||
WBPaper00062056:lin-36(we31)_downregulated | |||||||||
WBPaper00062056:lin-36(we31)_upregulated | |||||||||
WBPaper00062056:lin-36(we36)_downregulated | |||||||||
WBPaper00062056:lin-36(we36)_upregulated | |||||||||
Microarray_results (21) | |||||||||
Expression_cluster (137) | |||||||||
Interaction (247) | |||||||||
Map_info | Map | III | Position | -0.446585 | Error | 0.003437 | |||
Well_ordered | |||||||||
Positive | Positive_clone | E02E3 | |||||||
F44B9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||||
Mapping_data | Multi_point | 874 | |||||||
875 | |||||||||
876 | |||||||||
877 | |||||||||
878 | |||||||||
1098 | |||||||||
1105 | |||||||||
1107 | |||||||||
1886 | |||||||||
4220 | |||||||||
Pos_neg_data | 4346 | ||||||||
Reference (68) | |||||||||
Method | Gene |