WormBase Tree Display for Gene: WBGene00002263
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| WBGene00002263 | SMap | S_parent | Sequence | CHROMOSOME_V | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | lea-1 | |||||||
| Sequence_name | K08H10.1 | ||||||||
| Molecular_name (51) | |||||||||
| Other_name | lea | Accession_evidence | EMBL | AF016513 | |||||
| Ce-LEA | Paper_evidence | WBPaper00036159 | |||||||
| CELE_K08H10.1 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | lea-1 | ||||||||
| DB_info | Database | AceView | gene | 5K507 | |||||
| WormQTL | gene | WBGene00002263 | |||||||
| WormFlux | gene | WBGene00002263 | |||||||
| NDB | locus_tag | CELE_K08H10.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00002263|UniProtKB=H2FLL1 | |||||||
| family | PTHR47372 | ||||||||
| NCBI | gene | 3564838 | |||||||
| RefSeq | protein (17) | ||||||||
| TREEFAM | TREEFAM_ID | TF350492 | |||||||
| TrEMBL | UniProtAcc (17) | ||||||||
| UniProt_GCRP | UniProtAcc | H2FLL1 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:27 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 21 Jan 2011 10:43:00 | WBPerson4025 | Event | Acquires_merge | WBGene00010695 | ||||
| 3 | 05 Dec 2011 16:53:32 | WBPerson4025 | Event | Acquires_merge | WBGene00010696 | ||||
| Acquires_merge | WBGene00010695 | ||||||||
| WBGene00010696 | |||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | lea | ||||||||
| Allele (248) | |||||||||
| Possibly_affected_by | WBVar02157816 | ||||||||
| Strain | WBStrain00051752 | ||||||||
| WBStrain00051749 | |||||||||
| WBStrain00051753 | |||||||||
| WBStrain00051748 | |||||||||
| WBStrain00051751 | |||||||||
| WBStrain00051750 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00010383 | ||||||||
| 00021339 | |||||||||
| 00021340 | |||||||||
| 00021341 | |||||||||
| 00110332 | |||||||||
| 00110333 | |||||||||
| 00110334 | |||||||||
| 00110335 | |||||||||
| Contained_in_operon | CEOP5548 | ||||||||
| Ortholog (42) | |||||||||
| Structured_description | Concise_description | The lea-1 gene encodes a protein that is predicted to be hydrophilic and heat-resistant, and that might participate in anhydrobiosis. | Paper_evidence | WBPaper00013022 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable lipid binding activity. Involved in hyperosmotic response; response to desiccation; and response to heat. Predicted to be located in extracellular region. Expressed in several structures, including excretory cell; head; intestine; pharynx; and tail neurons. Is an ortholog of human PLIN4 (perilipin 4). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS (17) | ||||||||
| Corresponding_CDS_history | K08H10.1e:wp275 | ||||||||
| K08H10.1m:wp275 | |||||||||
| K08H10.1n:wp275 | |||||||||
| K08H10.1o:wp275 | |||||||||
| K08H10.1p:wp261 | |||||||||
| Corresponding_transcript (17) | |||||||||
| Other_sequence (41) | |||||||||
| Associated_feature (24) | |||||||||
| Experimental_info | RNAi_result (16) | ||||||||
| Expr_pattern (11) | |||||||||
| Drives_construct | WBCnstr00011741 | ||||||||
| WBCnstr00011742 | |||||||||
| WBCnstr00031213 | |||||||||
| WBCnstr00036348 | |||||||||
| Construct_product | WBCnstr00031213 | ||||||||
| WBCnstr00036348 | |||||||||
| Microarray_results (79) | |||||||||
| Expression_cluster (352) | |||||||||
| SAGE_tag (11) | |||||||||
| Interaction (28) | |||||||||
| Map_info | Map | V | Position | 2.23388 | Error | 0.001124 | |||
| Positive | Positive_clone | K08H10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00013321 | ||||||||
| WBPaper00024269 | |||||||||
| WBPaper00024566 | |||||||||
| WBPaper00026607 | |||||||||
| WBPaper00031132 | |||||||||
| WBPaper00034446 | |||||||||
| WBPaper00036159 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00039650 | |||||||||
| WBPaper00041022 | |||||||||
| WBPaper00049083 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00060275 | |||||||||
| WBPaper00061130 | |||||||||
| WBPaper00062379 | |||||||||
| WBPaper00062424 | |||||||||
| WBPaper00062722 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
