WormBase Tree Display for Gene: WBGene00002249
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| WBGene00002249 | SMap | S_parent | Sequence | ZK353 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | lap-1 | |||||||
| Sequence_name | ZK353.6 | ||||||||
| Molecular_name | ZK353.6 | ||||||||
| ZK353.6.1 | |||||||||
| CE00390 | |||||||||
| Other_name | CELE_ZK353.6 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | lap-1 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:27 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | lap | ||||||||
| Allele (29) | |||||||||
| Strain | WBStrain00037216 | ||||||||
| WBStrain00008272 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (20) | |||||||||
| Contained_in_operon | CEOP3520 | ||||||||
| Ortholog (42) | |||||||||
| Paralog | WBGene00002250 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | lap-1 encodes one of two C. elegans homologs of the M17 class of zinc metalloproteases, leucine aminopeptidase (LAP); lap-1 mutations result in slow growth and delayed onset of egg laying; lap-1 mRNA is present throughout the larval and adult life cycle and a lap-1 promoter fusion is expressed in the intestine; staining for LAP-1 protein reveals localization to the buccal cavity, pharynx, anterior gut and rectum. | Paper_evidence | WBPaper00004658 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| WBPerson567 | |||||||||
| Date_last_updated | 15 Jun 2011 00:00:00 | ||||||||
| Automated_description | Enables identical protein binding activity. Involved in regulation of egg-laying behavior and regulation of growth rate. Predicted to be located in cytoplasm. Expressed in buccal cavity; intestine; and pharynx. Is an ortholog of human NPEPL1 (aminopeptidase like 1). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | ZK353.6 | |||||||
| Corresponding_transcript | ZK353.6.1 | ||||||||
| Other_sequence (69) | |||||||||
| Associated_feature | WBsf667155 | ||||||||
| WBsf227129 | |||||||||
| WBsf227130 | |||||||||
| WBsf227131 | |||||||||
| Experimental_info | RNAi_result (15) | ||||||||
| Expr_pattern | Expr889 | ||||||||
| Expr890 | |||||||||
| Expr891 | |||||||||
| Expr1021639 | |||||||||
| Expr1031323 | |||||||||
| Expr1162782 | |||||||||
| Expr2013010 | |||||||||
| Expr2031242 | |||||||||
| Drives_construct | WBCnstr00013583 | ||||||||
| WBCnstr00036361 | |||||||||
| Construct_product | WBCnstr00013583 | ||||||||
| WBCnstr00036361 | |||||||||
| Antibody | WBAntibody00000362 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (115) | |||||||||
| Interaction (84) | |||||||||
| Map_info | Map | III | Position | -0.270877 | Error | 0.001411 | |||
| Positive | Positive_clone | ZK353 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Mapping_data | Multi_point | 4969 | |||||||
| 4740 | |||||||||
| 5521 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00004658 | ||||||||
| WBPaper00006047 | |||||||||
| WBPaper00006425 | |||||||||
| WBPaper00026640 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00049828 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00063976 | |||||||||
| Remark | Sequence connection from [Joshua GWP] | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
