WormBase Tree Display for Gene: WBGene00002231
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WBGene00002231 | SMap | S_parent | Sequence | C02F5 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | knl-1 | Person_evidence | WBPerson283 | |||||
Sequence_name | C02F5.1 | ||||||||
Molecular_name | C02F5.1 | ||||||||
C02F5.1.1 | |||||||||
CE02450 | |||||||||
Other_name | CELE_C02F5.1 | Accession_evidence | NDB | BX284603 | |||||
Public_name | knl-1 | ||||||||
DB_info | Database | AceView | gene | 3J343 | |||||
WormQTL | gene | WBGene00002231 | |||||||
WormFlux | gene | WBGene00002231 | |||||||
NDB | locus_tag | CELE_C02F5.1 | |||||||
NCBI | gene | 176164 | |||||||
RefSeq | protein | NM_066410.6 | |||||||
SwissProt | UniProtAcc | P34278 | |||||||
UniProt_GCRP | UniProtAcc | P34278 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:27 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | knl | ||||||||
Allele (38) | |||||||||
Strain | WBStrain00037542 | ||||||||
WBStrain00054973 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (47) | |||||||||
Ortholog (21) | |||||||||
Structured_description | Concise_description | knl-1 encodes a novel acidic protein with a coiled-coil region at its C-terminus; KNL-1 is an essential kinetochore component that is required for proper spindle elongation and chromosome separation, and in the kinetochore assembly pathway, plays a key role in linking the initiation of kinetochore formation with the construction of a functional microtubule-binding interface; in the assembly pathway, KNL-1 functions downstream of the DNA-proximal kinetochore components CeCENP-A/HCP-3 and CeCENP-B/HCP-4 and upstream of the outer kinetochore components HIM-10/Nuf2p, NDC-80/HEC1, CeBUB-1, HCP-1, and CeCLASP2/CLS-2; in expression studies in the one-cell embryo, KNL-1 localizes to kinetochores throughout mitosis. | Paper_evidence | WBPaper00004403 | |||||
WBPaper00006142 | |||||||||
Curator_confirmed | WBPerson1843 | ||||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Enables microtubule binding activity. Involved in several processes, including mitotic spindle assembly checkpoint signaling; organelle organization; and positive regulation of protein localization to kinetochore. Located in kinetochore. Part of chromatin and outer kinetochore. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C02F5.1 | |||||||
Corresponding_transcript | C02F5.1.1 | ||||||||
Other_sequence | CRC03589_1 | ||||||||
CBC01389_1 | |||||||||
CR01542 | |||||||||
CRC02283_1 | |||||||||
CR09829 | |||||||||
Associated_feature | WBsf645400 | ||||||||
WBsf659244 | |||||||||
Experimental_info | RNAi_result (23) | ||||||||
Expr_pattern | Expr2744 | ||||||||
Expr2745 | |||||||||
Expr1022071 | |||||||||
Expr1031308 | |||||||||
Expr1143556 | |||||||||
Expr1200218 | |||||||||
Expr2012972 | |||||||||
Expr2031204 | |||||||||
Drives_construct (19) | |||||||||
Construct_product (21) | |||||||||
Antibody | WBAntibody00000684 | ||||||||
WBAntibody00000685 | |||||||||
WBAntibody00001475 | |||||||||
Microarray_results (14) | |||||||||
Expression_cluster (170) | |||||||||
Interaction (93) | |||||||||
Map_info | Map | III | Position | -0.353023 | Error | 0.000263 | |||
Positive | Positive_clone | C02F5 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00006142 | ||||||||
WBPaper00024319 | |||||||||
WBPaper00024437 | |||||||||
WBPaper00024863 | |||||||||
WBPaper00025028 | |||||||||
WBPaper00026943 | |||||||||
WBPaper00027235 | |||||||||
WBPaper00031316 | |||||||||
WBPaper00032153 | |||||||||
WBPaper00032281 | |||||||||
WBPaper00036019 | |||||||||
WBPaper00036353 | |||||||||
WBPaper00037073 | |||||||||
WBPaper00037839 | |||||||||
WBPaper00040788 | |||||||||
WBPaper00043725 | |||||||||
WBPaper00045114 | |||||||||
WBPaper00046029 | |||||||||
WBPaper00046652 | |||||||||
WBPaper00046983 | |||||||||
WBPaper00051974 | |||||||||
WBPaper00052013 | |||||||||
WBPaper00052034 | |||||||||
WBPaper00056655 | |||||||||
WBPaper00056676 | |||||||||
WBPaper00057778 | |||||||||
WBPaper00059395 | |||||||||
WBPaper00060496 | |||||||||
WBPaper00060640 | |||||||||
WBPaper00064062 | |||||||||
WBPaper00065033 | |||||||||
WBPaper00065685 | |||||||||
WBPaper00066065 | |||||||||
Remark | Sequence connection from [Oegema K, Hyman AA], 02/06/010 krb | ||||||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
Method | Gene |