WormBase Tree Display for Gene: WBGene00002131
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| WBGene00002131 | SMap | S_parent | Sequence | ZK792 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | inx-9 | Person_evidence | WBPerson247 | |||||
| Sequence_name | ZK792.3 | ||||||||
| Molecular_name | ZK792.3 | ||||||||
| ZK792.3.1 | |||||||||
| CE37466 | |||||||||
| Other_name | opu-9 | ||||||||
| CELE_ZK792.3 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | inx-9 | ||||||||
| DB_info | Database | AceView | gene | 4M441 | |||||
| WormQTL | gene | WBGene00002131 | |||||||
| WormFlux | gene | WBGene00002131 | |||||||
| NDB | locus_tag | CELE_ZK792.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00002131|UniProtKB=Q23594 | |||||||
| family | PTHR11893 | ||||||||
| NCBI | gene | 191694 | |||||||
| RefSeq | protein | NM_069809.3 | |||||||
| TrEMBL | UniProtAcc | Q23594 | |||||||
| UniProt_GCRP | UniProtAcc | Q23594 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:26 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | inx | ||||||||
| Allele (37) | |||||||||
| Legacy_information | [Barnes TM] opu for OPUS protein. Predicted gene ZK792.3 | ||||||||
| Strain | WBStrain00035924 | ||||||||
| WBStrain00036232 | |||||||||
| WBStrain00005325 | |||||||||
| WBStrain00005698 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (17) | |||||||||
| Ortholog (59) | |||||||||
| Paralog (24) | |||||||||
| Structured_description | Concise_description | inx-9 encodes an innexin, an integral transmembrane channel protein that is a structural component of invertebrate gap junctions; although the precise role of INX-9 in C. elegans development and/or behavior is not yet known, INX-9 may play a role in gonad or germline development, as INX-9 expression is detected solely in the sheath cells of the somatic gonad and particularly, the sheath cells in contact with proximal oocytes. | Paper_evidence | WBPaper00002950 | |||||
| WBPaper00004670 | |||||||||
| WBPaper00005286 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable gap junction channel activity. Acts upstream of or within with a positive effect on germ cell proliferation. Located in gap junction. Expressed in several structures, including gonad; interfacial epithelial cell; nerve ring neurons; pharyngeal cell; and spermatocyte. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | ZK792.3 | |||||||
| Corresponding_CDS_history | ZK792.3:wp131 | ||||||||
| Corresponding_transcript | ZK792.3.1 | ||||||||
| Other_sequence | CJC10740_1 | ||||||||
| CJC08159_1 | |||||||||
| CJC14630_1 | |||||||||
| Associated_feature | WBsf229195 | ||||||||
| WBsf229196 | |||||||||
| Experimental_info | RNAi_result (13) | ||||||||
| Expr_pattern | Chronogram1760 | ||||||||
| Expr1952 | |||||||||
| Expr7254 | |||||||||
| Expr8677 | |||||||||
| Expr11974 | |||||||||
| Expr1022372 | |||||||||
| Expr1163136 | |||||||||
| Expr2012804 | |||||||||
| Expr2031043 | |||||||||
| Drives_construct | WBCnstr00002427 | ||||||||
| WBCnstr00010543 | |||||||||
| WBCnstr00013444 | |||||||||
| WBCnstr00016945 | |||||||||
| WBCnstr00019949 | |||||||||
| WBCnstr00036429 | |||||||||
| Construct_product | WBCnstr00019949 | ||||||||
| WBCnstr00021843 | |||||||||
| WBCnstr00036429 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (119) | |||||||||
| Interaction (133) | |||||||||
| Map_info | Map | IV | Position | 5.17869 | Error | 0.012345 | |||
| Positive | Positive_clone | ZK792 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| ZK892 | Person_evidence | WBPerson43 | |||||||
| Mapping_data | Multi_point | 4920 | |||||||
| 4445 | |||||||||
| Pseudo_map_position | |||||||||
| Reference (12) | |||||||||
| Picture | WBPicture0000013094 | ||||||||
| Remark | ZK180.4 link removed by agreement. [sdm 0107] | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
