WormBase Tree Display for Gene: WBGene00002067
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WBGene00002067 | SMap | S_parent | Sequence | C43C3 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | ifp | ||||||
Allele (100) | |||||||
Strain | WBStrain00032110 | ||||||
WBStrain00032142 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (12) | |||||||
Ortholog (27) | |||||||
Paralog (12) | |||||||
Structured_description | Concise_description | ifp-1 encodes a nonessential intermediate filament protein; IFP-1 is predicted to function as a structural component of the cytoskeleton; IFP-1 has no obvious function in RNAi assays. | Paper_evidence | WBPaper00004651 | |||
WBPaper00004761 | |||||||
WBPaper00005654 | |||||||
Curator_confirmed | WBPerson1843 | ||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||
Automated_description | Predicted to be a structural constituent of cytoskeleton. Predicted to be involved in cellular localization; heterochromatin formation; and nucleus organization. Predicted to be located in nuclear envelope and nuclear lamina. Expressed in head; head neurons; intestine; pharynx; and ventral nerve cord. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | C43C3.1 | |||||
Corresponding_transcript | C43C3.1.1 | ||||||
Other_sequence | CBC07359_1 | ||||||
Associated_feature (11) | |||||||
Experimental_info | RNAi_result | WBRNAi00042369 | Inferred_automatically | RNAi_primary | |||
WBRNAi00007224 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00062658 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00113723 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00011878 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00062659 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00001853 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00062657 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00098350 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00113719 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr3400 | ||||||
Expr3401 | |||||||
Expr13742 | |||||||
Expr13743 | |||||||
Expr15265 | |||||||
Expr1016212 | |||||||
Expr1031220 | |||||||
Expr1146355 | |||||||
Expr2012696 | |||||||
Expr2030932 | |||||||
Drives_construct | WBCnstr00011379 | ||||||
WBCnstr00036480 | |||||||
WBCnstr00039966 | |||||||
WBCnstr00039967 | |||||||
WBCnstr00042146 | |||||||
Construct_product | WBCnstr00036480 | ||||||
WBCnstr00039967 | |||||||
WBCnstr00042146 | |||||||
Antibody | WBAntibody00000798 | ||||||
Microarray_results (18) | |||||||
Expression_cluster (255) | |||||||
Interaction (91) | |||||||
Map_info | Map | X | Position | 1.43346 | Error | 0.003538 | |
Positive | Positive_clone | C43C3 | Inferred_automatically | From CDS info | |||
From sequence, transcript, pseudogene data | |||||||
Mapping_data | Multi_point | 5573 | |||||
Pseudo_map_position | |||||||
Reference | WBPaper00004761 | ||||||
WBPaper00041022 | |||||||
WBPaper00055090 | |||||||
WBPaper00056033 | |||||||
WBPaper00056896 | |||||||
WBPaper00057758 | |||||||
WBPaper00059330 | |||||||
WBPaper00061750 | |||||||
WBPaper00065558 | |||||||
Remark | Sequence connection from [Karabinos A, Weber K]. krb 13/11/01 | ||||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||
Method | Gene |