WormBase Tree Display for Gene: WBGene00002067

WBGene00002067 SMap: S_parent: Sequence: C43C3
  Identity: Version: 1
    Name: CGC_name: ifp-1
      Sequence_name: C43C3.1
      Molecular_name: C43C3.1
        C43C3.1.1
        CE01523
      Other_name: IF E1
        CELE_C43C3.1 Accession_evidence: NDB BX284606
      Public_name: ifp-1
    DB_info: Database: AceView gene XK296
        WormQTL gene WBGene00002067
        WormFlux gene WBGene00002067
        NDB locus_tag CELE_C43C3.1
        Panther gene CAEEL|WormBase=WBGene00002067|UniProtKB=Q09501
          family PTHR45721
        NCBI gene 181182
        RefSeq protein NM_077227.8
        SwissProt UniProtAcc Q09501
        TREEFAM TREEFAM_ID TF316392
        UniProt_GCRP UniProtAcc Q09501
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:26 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ifp
    Allele (100)
    Strain: WBStrain00032110
      WBStrain00032142
    RNASeq_FPKM (74)
    GO_annotation (12)
    Ortholog (27)
    Paralog (12)
    Structured_description: Concise_description: ifp-1 encodes a nonessential intermediate filament protein; IFP-1 is predicted to function as a structural component of the cytoskeleton; IFP-1 has no obvious function in RNAi assays. Paper_evidence: WBPaper00004651
            WBPaper00004761
            WBPaper00005654
          Curator_confirmed: WBPerson1843
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Predicted to be a structural constituent of cytoskeleton. Predicted to be involved in cellular localization; heterochromatin formation; and nucleus organization. Predicted to be located in nuclear envelope and nuclear lamina. Expressed in head; head neurons; intestine; pharynx; and ventral nerve cord. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C43C3.1
    Corresponding_transcript: C43C3.1.1
    Other_sequence: CBC07359_1
    Associated_feature (11)
  Experimental_info: RNAi_result: WBRNAi00042369 Inferred_automatically: RNAi_primary
      WBRNAi00007224 Inferred_automatically: RNAi_primary
      WBRNAi00062658 Inferred_automatically: RNAi_primary
      WBRNAi00113723 Inferred_automatically: RNAi_primary
      WBRNAi00011878 Inferred_automatically: RNAi_primary
      WBRNAi00062659 Inferred_automatically: RNAi_primary
      WBRNAi00001853 Inferred_automatically: RNAi_primary
      WBRNAi00062657 Inferred_automatically: RNAi_primary
      WBRNAi00098350 Inferred_automatically: RNAi_primary
      WBRNAi00113719 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr3400
      Expr3401
      Expr13742
      Expr13743
      Expr15265
      Expr1016212
      Expr1031220
      Expr1146355
      Expr2012696
      Expr2030932
    Drives_construct: WBCnstr00011379
      WBCnstr00036480
      WBCnstr00039966
      WBCnstr00039967
      WBCnstr00042146
    Construct_product: WBCnstr00036480
      WBCnstr00039967
      WBCnstr00042146
    Antibody: WBAntibody00000798
    Microarray_results (18)
    Expression_cluster (255)
    Interaction: WBInteraction000030389
      WBInteraction000030689
      WBInteraction000030893
      WBInteraction000141382
      WBInteraction000160860
      WBInteraction000171169
      WBInteraction000171462
      WBInteraction000178336
      WBInteraction000186087
      WBInteraction000189989
      WBInteraction000200077
      WBInteraction000205375
      WBInteraction000206697
      WBInteraction000212884
      WBInteraction000219148
      WBInteraction000221182
      WBInteraction000226838
      WBInteraction000229069
      WBInteraction000246956
      WBInteraction000251760
      WBInteraction000253236
      WBInteraction000257507
      WBInteraction000259020
      WBInteraction000270567
      WBInteraction000272359
      WBInteraction000286689
      WBInteraction000287851
      WBInteraction000288876
      WBInteraction000307185
      WBInteraction000307362
      WBInteraction000314204
      WBInteraction000315219
      WBInteraction000316113
      WBInteraction000316800
      WBInteraction000318946
      WBInteraction000320455
      WBInteraction000328276
      WBInteraction000328502
      WBInteraction000332448
      WBInteraction000332494
      WBInteraction000338875
      WBInteraction000341486
      WBInteraction000344004
      WBInteraction000358331
      WBInteraction000364908
      WBInteraction000364936
      WBInteraction000371156
      WBInteraction000372208
      WBInteraction000373078
      WBInteraction000386577
      WBInteraction000391825
      WBInteraction000398150
      WBInteraction000398177
      WBInteraction000403615
      WBInteraction000404359
      WBInteraction000408474
      WBInteraction000415494
      WBInteraction000415690
      WBInteraction000416041
      WBInteraction000418833
      WBInteraction000419150
      WBInteraction000421003
      WBInteraction000423565
      WBInteraction000425745
      WBInteraction000438616
      WBInteraction000454726
      WBInteraction000455119
      WBInteraction000455308
      WBInteraction000455698
      WBInteraction000456744
      WBInteraction000460599
      WBInteraction000462515
      WBInteraction000503106
      WBInteraction000516115
      WBInteraction000516765
      WBInteraction000536486
      WBInteraction000552751
      WBInteraction000563385
      WBInteraction000563395
      WBInteraction000563402
      WBInteraction000563408
      WBInteraction000563966
      WBInteraction000565509
      WBInteraction000566070
      WBInteraction000566782
      WBInteraction000566803
      WBInteraction000572426
      WBInteraction000573446
      WBInteraction000576399
      WBInteraction000578553
      WBInteraction000582377
  Map_info: Map: X Position: 1.43346 Error: 0.003538
    Positive: Positive_clone: C43C3 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 5573
    Pseudo_map_position
  Reference: WBPaper00004761
    WBPaper00041022
    WBPaper00055090
    WBPaper00056033
    WBPaper00056896
    WBPaper00057758
    WBPaper00059330
    WBPaper00061750
    WBPaper00065558
  Remark: Sequence connection from [Karabinos A, Weber K]. krb 13/11/01
    Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene