WormBase Tree Display for Gene: WBGene00002055
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WBGene00002055 | SMap | S_parent | Sequence | F37B4 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | ifc-1 | Person_evidence | WBPerson105 | |||||
WBPerson293 | |||||||||
Sequence_name | F37B4.2 | ||||||||
Molecular_name | F37B4.2 | ||||||||
F37B4.2.1 | |||||||||
CE27378 | |||||||||
Other_name | Cel IF C1 | Accession_evidence | EMBL | X70832 | |||||
CelIF c1 | |||||||||
CELE_F37B4.2 | Accession_evidence | NDB | BX284605 | ||||||
Public_name | ifc-1 | ||||||||
DB_info | Database (11) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:26 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | ifc | ||||||||
Allele (60) | |||||||||
Strain | WBStrain00032410 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (12) | |||||||||
Ortholog (49) | |||||||||
Paralog (12) | |||||||||
Structured_description | Concise_description | ifc-1 encodes a nonessential intermediate filament protein; IFC-1 is predicted to function as a structural component of the cytoskeleton; IFC-1 has no function in RNAi assays. | Paper_evidence | WBPaper00001981 | |||||
WBPaper00004761 | |||||||||
WBPaper00005654 | |||||||||
Curator_confirmed | WBPerson1843 | ||||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Predicted to be a structural constituent of cytoskeleton. Predicted to be involved in cellular localization; heterochromatin formation; and nucleus organization. Predicted to be located in nuclear envelope and nuclear lamina. Expressed in hypodermis; intestine; and pharynx. Human ortholog(s) of this gene implicated in several diseases, including Dowling-Degos disease; ichthyosis (multiple); and palmoplantar keratosis (multiple). Is an ortholog of several human genes including KRT1 (keratin 1); KRT2 (keratin 2); and KRT3 (keratin 3). | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Potential_model (14) | ||||||||
Molecular_info | Corresponding_CDS | F37B4.2 | |||||||
Corresponding_transcript | F37B4.2.1 | ||||||||
Other_sequence | CJC06704_1 | ||||||||
CBC04609_1 | |||||||||
CBC08053_1 | |||||||||
CBC01028_1 | |||||||||
Associated_feature | WBsf661170 | ||||||||
WBsf231539 | |||||||||
WBsf231540 | |||||||||
WBsf231541 | |||||||||
Experimental_info | RNAi_result | WBRNAi00007220 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00014485 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00046594 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00097123 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00062649 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00062650 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00098345 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr3398 | ||||||||
Expr15263 | |||||||||
Expr1025855 | |||||||||
Expr1031208 | |||||||||
Expr1150478 | |||||||||
Expr2012681 | |||||||||
Expr2030917 | |||||||||
Drives_construct | WBCnstr00011377 | ||||||||
WBCnstr00036489 | |||||||||
WBCnstr00042144 | |||||||||
Construct_product | WBCnstr00011377 | ||||||||
WBCnstr00036489 | |||||||||
WBCnstr00042144 | |||||||||
Antibody | WBAntibody00000796 | ||||||||
Microarray_results (17) | |||||||||
Expression_cluster (267) | |||||||||
Interaction (77) | |||||||||
Map_info | Map | V | Position | -12.8753 | Error | 0.001266 | |||
Positive | Positive_clone | F37B4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference (13) | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |