WormBase Tree Display for Gene: WBGene00002033
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| WBGene00002033 | Evidence | Person_evidence | WBPerson715 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | Y73B6BL | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | htp-2 | Person_evidence | WBPerson715 | |||||
| Sequence_name | Y73B6BL.2 | ||||||||
| Molecular_name | Y73B6BL.2 | ||||||||
| Y73B6BL.2.1 | |||||||||
| CE37734 | |||||||||
| Other_name | CELE_Y73B6BL.2 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | htp-2 | ||||||||
| DB_info | Database | AceView | gene | 4H185 | |||||
| WormQTL | gene | WBGene00002033 | |||||||
| WormFlux | gene | WBGene00002033 | |||||||
| NDB | locus_tag | CELE_Y73B6BL.2 | |||||||
| NCBI | gene | 177405 | |||||||
| RefSeq | protein | NM_068580.8 | |||||||
| TREEFAM | TREEFAM_ID | TF313989 | |||||||
| TrEMBL | UniProtAcc | Q95XC8 | |||||||
| UniProt_GCRP | UniProtAcc | Q95XC8 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:26 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | htp | ||||||||
| Allele (27) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00088885 | ||||||||
| 00088886 | |||||||||
| Ortholog (52) | |||||||||
| Paralog | WBGene00002032 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| WBGene00001862 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Concise_description | htp-2 encodes, along with him-3, htp-1, and htp-3, one of four C. elegans meiosis-specific HORMA domain-containing proteins; HTP-2 is a component of the lateral element of the synaptonemal complex, and functions to regulate synaptonemal complex assembly and meiotic chromosome segregation. | Paper_evidence | WBPaper00031675 | |||||
| WBPaper00032270 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 03 May 2010 00:00:00 | ||||||||
| Automated_description | Involved in regulation of centriole-centriole cohesion. Located in lateral element. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y73B6BL.2 | |||||||
| Corresponding_CDS_history | Y73B6BL.2:wp134 | ||||||||
| Corresponding_transcript | Y73B6BL.2.1 | ||||||||
| Associated_feature | WBsf228408 | ||||||||
| WBsf228409 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00058318 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr14397 | ||||||||
| Expr1031188 | |||||||||
| Expr1161727 | |||||||||
| Expr2012640 | |||||||||
| Expr2030876 | |||||||||
| Drives_construct | WBCnstr00006070 | ||||||||
| WBCnstr00036507 | |||||||||
| WBCnstr00040837 | |||||||||
| Construct_product | WBCnstr00006070 | ||||||||
| WBCnstr00036507 | |||||||||
| WBCnstr00040837 | |||||||||
| Antibody | WBAntibody00001878 | ||||||||
| WBAntibody00002688 | |||||||||
| Microarray_results (13) | |||||||||
| Expression_cluster (110) | |||||||||
| Interaction | WBInteraction000519018 | ||||||||
| WBInteraction000541790 | |||||||||
| WBInteraction000554901 | |||||||||
| WBInteraction000554907 | |||||||||
| WBInteraction000554915 | |||||||||
| WBInteraction000556146 | |||||||||
| WBInteraction000570683 | |||||||||
| WBInteraction000578927 | |||||||||
| Map_info | Map | IV | Position | 3.19809 | Error | 0.000109 | |||
| Positive | Positive_clone | Y73B6BL | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00026268 | ||||||||
| WBPaper00028727 | |||||||||
| WBPaper00031675 | |||||||||
| WBPaper00032270 | |||||||||
| WBPaper00032294 | |||||||||
| WBPaper00034684 | |||||||||
| WBPaper00035468 | |||||||||
| WBPaper00036206 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00041481 | |||||||||
| WBPaper00041994 | |||||||||
| WBPaper00046149 | |||||||||
| WBPaper00047886 | |||||||||
| WBPaper00053775 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00060187 | |||||||||
| WBPaper00060563 | |||||||||
| WBPaper00060611 | |||||||||
| WBPaper00064349 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
