WormBase Tree Display for Gene: WBGene00002016

WBGene00002016 SMap: S_parent: Sequence: Y46H3A
  Identity: Version: 1
    Name: CGC_name: hsp-16.2 Person_evidence: WBPerson36
      Sequence_name: Y46H3A.3
      Molecular_name: Y46H3A.3a
        Y46H3A.3a.1
        CE22002
        Y46H3A.3b
        CE49428
        Y46H3A.3b.1
      Other_name: hsp-16
        hsp16-2 Paper_evidence: WBPaper00035961
        CELE_Y46H3A.3 Accession_evidence: NDB BX284605
      Public_name: hsp-16.2
    DB_info: Database: AceView gene 5C282
        WormQTL gene WBGene00002016
        WormFlux gene WBGene00002016
        NDB locus_tag CELE_Y46H3A.3
        Panther gene CAEEL|WormBase=WBGene00002016|UniProtKB=P06582
          family PTHR45640
        NCBI gene 178659
        RefSeq protein NM_001392482.1
            NM_001307736.3
        SwissProt UniProtAcc P06582
        TrEMBL UniProtAcc V6CLQ2
        UniProt_GCRP UniProtAcc P06582
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:26 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: hsp
    Allele (16)
    Strain (36)
    In_cluster: HSP16B
    RNASeq_FPKM (74)
    GO_annotation: 00038912
      00038913
      00038914
      00038915
      00038916
      00038917
      00038918
      00038919
      00038920
      00105435
    Ortholog (92)
    Paralog (17)
    Structured_description: Concise_description: hsp-16.2 encodes a 16-kD heat shock protein (HSP) that is a member of the hsp16/hsp20/alphaB-crystallin (HSP16) family of heat shock proteins; hsp-16.2 expression, strongest in intestine and pharynx, is induced in response to heat shock or other environmental stresses; HSP-16.2 has been shown to interact with intracellular human beta amyloid peptide, a primary component of the extracellular plaques found in Alzheimer's disease; HSP-16.2 is likely to function as a passive ligand temporarily preventing unfolded proteins from aggregating. Paper_evidence: WBPaper00001187
            WBPaper00001497
            WBPaper00002665
            WBPaper00003787
            WBPaper00004424
            WBPaper00005371
            WBPaper00013029
            WBPaper00013239
            WBPaper00013280
          Curator_confirmed: WBPerson1843
          Date_last_updated: 05 Nov 2004 00:00:00
      Automated_description: Predicted to enable unfolded protein binding activity. Involved in response to heat. Located in cytoplasm. Expressed in several structures, including coelomocyte; enteric muscle; gonad; somatic nervous system; and spermatid. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y46H3A.3a
      Y46H3A.3b
    Corresponding_transcript: Y46H3A.3a.1
      Y46H3A.3b.1
    Other_sequence (86)
    Associated_feature: WBsf652481
      WBsf652482
      WBsf919559
      WBsf919560
      WBsf919561
      WBsf919562
      WBsf233356
      WBsf233357
      WBsf233358
  Experimental_info: RNAi_result: WBRNAi00020672 Inferred_automatically: RNAi_primary
      WBRNAi00027604 Inferred_automatically: RNAi_primary
      WBRNAi00076795 Inferred_automatically: RNAi_primary
      WBRNAi00063187 Inferred_automatically: RNAi_primary
      WBRNAi00113926 Inferred_automatically: RNAi_primary
      WBRNAi00063652 Inferred_automatically: RNAi_primary
      WBRNAi00056700 Inferred_automatically: RNAi_primary
      WBRNAi00070128 Inferred_automatically: RNAi_primary
      WBRNAi00106382 Inferred_automatically: RNAi_primary
      WBRNAi00113923 Inferred_automatically: RNAi_primary
    Expr_pattern (12)
    Drives_construct (233)
    Construct_product: WBCnstr00004969
      WBCnstr00010254
      WBCnstr00021901
      WBCnstr00036520
      WBCnstr00042208
    Antibody: WBAntibody00000050
      WBAntibody00001324
      WBAntibody00001797
      WBAntibody00001844
      WBAntibody00001859
    Microarray_results (16)
    Expression_cluster (393)
    Interaction (315)
    WBProcess: WBbiopr:00000050
  Map_info: Map: V Position: -17.5804 Error: 0.043798
    Positive: Positive_clone: Y46H3A Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 4418
        5335
    Pseudo_map_position
  Reference: WBPaper00000639
    WBPaper00000928
    WBPaper00001187
    WBPaper00001497
    WBPaper00001695
    WBPaper00003696
    WBPaper00003787
    WBPaper00004756
    WBPaper00004890
    WBPaper00005432
    WBPaper00005725
    WBPaper00005897
    WBPaper00005976
    WBPaper00006475
    WBPaper00010085
    WBPaper00012750
    WBPaper00013029
    WBPaper00014033
    WBPaper00014098
    WBPaper00014602
    WBPaper00014605
    WBPaper00014652
    WBPaper00014789
    WBPaper00014815
    WBPaper00018335
    WBPaper00018679
    WBPaper00018866
    WBPaper00019010
    WBPaper00022083
    WBPaper00022221
    WBPaper00022623
    WBPaper00022850
    WBPaper00023016
    WBPaper00024557
    WBPaper00024560
    WBPaper00024662
    WBPaper00025088
    WBPaper00025734
    WBPaper00026172
    WBPaper00026672
    WBPaper00026926
    WBPaper00027105
    WBPaper00027570
    WBPaper00028660
    WBPaper00028782
    WBPaper00030183
    WBPaper00030825
    WBPaper00031091
    WBPaper00031106
    WBPaper00031190
    WBPaper00031250
    WBPaper00031326
    WBPaper00031874
    WBPaper00032136
    WBPaper00032143
    WBPaper00032151
    WBPaper00032435
    WBPaper00032575
    WBPaper00032638
    WBPaper00032950
    WBPaper00033247
    WBPaper00033281
    WBPaper00033590
    WBPaper00033830
    WBPaper00033902
    WBPaper00033907
    WBPaper00033954
    WBPaper00034389
    WBPaper00034636
    WBPaper00034717
    WBPaper00035663
    WBPaper00036153
    WBPaper00036287
    WBPaper00036396
    WBPaper00036514
    WBPaper00036965
    WBPaper00037009
    WBPaper00037128
    WBPaper00037467
    WBPaper00037498
    WBPaper00038237
    WBPaper00038357
    WBPaper00038491
    WBPaper00038729
    WBPaper00038911
    WBPaper00039710
    WBPaper00039791
    WBPaper00040072
    WBPaper00040135
    WBPaper00040382
    WBPaper00040407
    WBPaper00040597
    WBPaper00041128
    WBPaper00041403
    WBPaper00041413
    WBPaper00041507
    WBPaper00041580
    WBPaper00041582
    WBPaper00041835
    WBPaper00042036
    WBPaper00042078
    WBPaper00042158
    WBPaper00042172
    WBPaper00042511
    WBPaper00042772
    WBPaper00042865
    WBPaper00043089
    WBPaper00043320
    WBPaper00043865
    WBPaper00043968
    WBPaper00044508
    WBPaper00044584
    WBPaper00045605
    WBPaper00045633
    WBPaper00045813
    WBPaper00045887
    WBPaper00046332
    WBPaper00046604
    WBPaper00046622
    WBPaper00046881
    WBPaper00047492
    WBPaper00047519
    WBPaper00047522
    WBPaper00047562
    WBPaper00047593
    WBPaper00047601
    WBPaper00047651
    WBPaper00047669
    WBPaper00048043
    WBPaper00048461
    WBPaper00048906
    WBPaper00049096
    WBPaper00049118
    WBPaper00049251
    WBPaper00049454
    WBPaper00049631
    WBPaper00049758
    WBPaper00050103
    WBPaper00050288
    WBPaper00050463
    WBPaper00050564
    WBPaper00050778
    WBPaper00051022
    WBPaper00051193
    WBPaper00051273
    WBPaper00051442
    WBPaper00051443
    WBPaper00051554
    WBPaper00051687
    WBPaper00051915
    WBPaper00052052
    WBPaper00052838
    WBPaper00053044
    WBPaper00053221
    WBPaper00053228
    WBPaper00053462
    WBPaper00053585
    WBPaper00053805
    WBPaper00053825
    WBPaper00053903
    WBPaper00054641
    WBPaper00054749
    WBPaper00054805
    WBPaper00054831
    WBPaper00054865
    WBPaper00054902
    WBPaper00055016
    WBPaper00055090
    WBPaper00055319
    WBPaper00055326
    WBPaper00056044
    WBPaper00056092
    WBPaper00056225
    WBPaper00056240
    WBPaper00056392
    WBPaper00056841
    WBPaper00056888
    WBPaper00056956
    WBPaper00057000
    WBPaper00057101
    WBPaper00057172
    WBPaper00057259
    WBPaper00058426
    WBPaper00058621
    WBPaper00058982
    WBPaper00059256
    WBPaper00059303
    WBPaper00059321
    WBPaper00059354
    WBPaper00059553
    WBPaper00059596
    WBPaper00059627
    WBPaper00059685
    WBPaper00059705
    WBPaper00060029
    WBPaper00060156
    WBPaper00060180
    WBPaper00060685
    WBPaper00060718
    WBPaper00060858
    WBPaper00060896
    WBPaper00060967
    WBPaper00061067
    WBPaper00061304
    WBPaper00061585
    WBPaper00061938
    WBPaper00062014
    WBPaper00062052
    WBPaper00062191
    WBPaper00062357
    WBPaper00062518
    WBPaper00062555
    WBPaper00062609
    WBPaper00062712
    WBPaper00062756
    WBPaper00063416
    WBPaper00063895
    WBPaper00063942
    WBPaper00064013
    WBPaper00064015
    WBPaper00064112
    WBPaper00064130
    WBPaper00064255
    WBPaper00064258
    WBPaper00064284
    WBPaper00064354
    WBPaper00064406
    WBPaper00064460
    WBPaper00064548
    WBPaper00064634
    WBPaper00064832
    WBPaper00064833
    WBPaper00064834
    WBPaper00064855
    WBPaper00064894
    WBPaper00064908
    WBPaper00064977
    WBPaper00065141
    WBPaper00065156
    WBPaper00065277
    WBPaper00065584
    WBPaper00065720
    WBPaper00065749
    WBPaper00065864
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene