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WormBase Tree Display for Gene: WBGene00001991

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Name Class

WBGene00001991EvidenceCGC_data_submission
SMapS_parentSequenceC13G3
IdentityVersion2
NameCGC_namehot-6Person_evidenceWBPerson42
Sequence_nameC13G3.2
Molecular_nameC13G3.2
C13G3.2.1
CE05278
Other_nameCELE_C13G3.2Accession_evidenceNDBBX284605
Public_namehot-6
DB_infoDatabaseAceViewgene5L502
WormQTLgeneWBGene00001991
WormFluxgeneWBGene00001991
NDBlocus_tagCELE_C13G3.2
NCBIgene179525
RefSeqproteinNM_073405.2
TREEFAMTREEFAM_IDTF319227
TrEMBLUniProtAccG5EER8
UniProt_GCRPUniProtAccG5EER8
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:26WBPerson1971EventImportedInitial conversion from geneace
202 Mar 2018 10:40:20WBPerson4025EventSplit_intoWBGene00303040
Split_intoWBGene00303040
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classhot
Allele (34)
StrainWBStrain00047574
RNASeq_FPKM (74)
GO_annotation00016782
Ortholog (24)
Structured_descriptionAutomated_descriptionPredicted to be located in membrane.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC13G3.2
Corresponding_CDS_historyC13G3.2a:wp264
C13G3.2b:wp264
Corresponding_transcriptC13G3.2.1
Other_sequenceAF324058
Associated_featureWBsf653057
WBsf1001250
WBsf234485
Experimental_infoRNAi_resultWBRNAi00028852Inferred_automaticallyRNAi_primary
WBRNAi00040454Inferred_automaticallyRNAi_primary
Expr_patternExpr1019438
Expr1144520
Expr2012544
Expr2030783
Drives_constructWBCnstr00036535
Construct_productWBCnstr00036535
Microarray_results (16)
Expression_cluster (146)
Interaction (14)
Map_infoMapVPosition2.88673Error0.003973
PositivePositive_cloneC13G3Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00004498
RemarkSequence connection from [Chou JH, Bargmann CI, Sengupta P]
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene