WormBase Tree Display for Gene: WBGene00001962
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| WBGene00001962 | Evidence | CGC_data_submission | |||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F57C12 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | hlh-19 | Person_evidence | WBPerson346 | |||||
| Sequence_name | F57C12.3 | ||||||||
| Molecular_name | F57C12.3 | ||||||||
| F57C12.3.1 | |||||||||
| CE39579 | |||||||||
| Other_name | CELE_F57C12.3 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | hlh-19 | ||||||||
| DB_info | Database | AceView | gene | XB174 | |||||
| WormQTL | gene | WBGene00001962 | |||||||
| WormFlux | gene | WBGene00001962 | |||||||
| NDB | locus_tag | CELE_F57C12.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00001962|UniProtKB=Q20941 | |||||||
| family | PTHR23349 | ||||||||
| NCBI | gene | 186449 | |||||||
| RefSeq | protein | NM_075718.6 | |||||||
| TrEMBL | UniProtAcc | Q20941 | |||||||
| UniProt_GCRP | UniProtAcc | Q20941 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:26 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | hlh | ||||||||
| Allele (21) | |||||||||
| Strain | WBStrain00037045 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00069699 | ||||||||
| 00069700 | |||||||||
| 00069701 | |||||||||
| 00069702 | |||||||||
| 00069703 | |||||||||
| 00109816 | |||||||||
| Ortholog (11) | |||||||||
| Paralog | WBGene00001953 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00001954 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00001956 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00001957 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00001981 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Predicted to be involved in developmental process and regulation of transcription by RNA polymerase II. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F57C12.3 | |||||||
| Corresponding_CDS_history | F57C12.3:wp153 | ||||||||
| Corresponding_transcript | F57C12.3.1 | ||||||||
| Associated_feature | WBsf653653 | ||||||||
| WBsf670063 | |||||||||
| WBsf978493 | |||||||||
| WBsf1003803 | |||||||||
| WBsf1022142 | |||||||||
| WBsf236930 | |||||||||
| Transcription_factor | WBTranscriptionFactor000080 | ||||||||
| WBTranscriptionFactor000071 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00033024 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00092852 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00048849 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00015882 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1011555 | ||||||||
| Expr1152598 | |||||||||
| Expr2012498 | |||||||||
| Expr2030737 | |||||||||
| Drives_construct | WBCnstr00036557 | ||||||||
| Construct_product | WBCnstr00016889 | ||||||||
| WBCnstr00036557 | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (53) | |||||||||
| Interaction (56) | |||||||||
| Map_info | Map | X | Position | -19.6807 | Error | 0.009023 | |||
| Positive | Positive_clone | F57C12 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027309 | ||||||||
| WBPaper00034018 | |||||||||
| WBPaper00034761 | |||||||||
| WBPaper00041549 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
