WormBase Tree Display for Gene: WBGene00001962

WBGene00001962 Evidence: CGC_data_submission
  SMap: S_parent: Sequence: F57C12
  Identity: Version: 1
    Name: CGC_name: hlh-19 Person_evidence: WBPerson346
      Sequence_name: F57C12.3
      Molecular_name: F57C12.3
        F57C12.3.1
        CE39579
      Other_name: CELE_F57C12.3 Accession_evidence: NDB BX284606
      Public_name: hlh-19
    DB_info: Database: AceView gene XB174
        WormQTL gene WBGene00001962
        WormFlux gene WBGene00001962
        NDB locus_tag CELE_F57C12.3
        Panther gene CAEEL|WormBase=WBGene00001962|UniProtKB=Q20941
          family PTHR23349
        NCBI gene 186449
        RefSeq protein NM_075718.6
        TrEMBL UniProtAcc Q20941
        UniProt_GCRP UniProtAcc Q20941
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:26 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: hlh
    Allele (21)
    Strain: WBStrain00037045
    RNASeq_FPKM (74)
    GO_annotation: 00069699
      00069700
      00069701
      00069702
      00069703
      00109816
    Ortholog (11)
    Paralog: WBGene00001953 Caenorhabditis elegans From_analysis: Panther
      WBGene00001954 Caenorhabditis elegans From_analysis: Panther
      WBGene00001956 Caenorhabditis elegans From_analysis: Panther
      WBGene00001957 Caenorhabditis elegans From_analysis: Panther
      WBGene00001981 Caenorhabditis elegans From_analysis: Panther
    Structured_description: Automated_description: Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Predicted to be involved in developmental process and regulation of transcription by RNA polymerase II. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F57C12.3
    Corresponding_CDS_history: F57C12.3:wp153
    Corresponding_transcript: F57C12.3.1
    Associated_feature: WBsf653653
      WBsf670063
      WBsf978493
      WBsf1003803
      WBsf1022142
      WBsf236930
    Transcription_factor: WBTranscriptionFactor000080
      WBTranscriptionFactor000071
  Experimental_info: RNAi_result: WBRNAi00033024 Inferred_automatically: RNAi_primary
      WBRNAi00092852 Inferred_automatically: RNAi_primary
      WBRNAi00048849 Inferred_automatically: RNAi_primary
      WBRNAi00015882 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1011555
      Expr1152598
      Expr2012498
      Expr2030737
    Drives_construct: WBCnstr00036557
    Construct_product: WBCnstr00016889
      WBCnstr00036557
    Microarray_results (18)
    Expression_cluster (53)
    Interaction: WBInteraction000133484
      WBInteraction000135670
      WBInteraction000146258
      WBInteraction000150257
      WBInteraction000161236
      WBInteraction000171873
      WBInteraction000172761
      WBInteraction000179984
      WBInteraction000187525
      WBInteraction000190455
      WBInteraction000191950
      WBInteraction000201082
      WBInteraction000204334
      WBInteraction000204995
      WBInteraction000208179
      WBInteraction000215050
      WBInteraction000217606
      WBInteraction000217655
      WBInteraction000220542
      WBInteraction000231413
      WBInteraction000233697
      WBInteraction000241732
      WBInteraction000247793
      WBInteraction000248439
      WBInteraction000250938
      WBInteraction000251862
      WBInteraction000262493
      WBInteraction000263332
      WBInteraction000276568
      WBInteraction000284720
      WBInteraction000285082
      WBInteraction000296583
      WBInteraction000305518
      WBInteraction000308729
      WBInteraction000314026
      WBInteraction000319027
      WBInteraction000341779
      WBInteraction000343026
      WBInteraction000347666
      WBInteraction000350485
      WBInteraction000351116
      WBInteraction000361857
      WBInteraction000363420
      WBInteraction000371389
      WBInteraction000390710
      WBInteraction000390902
      WBInteraction000402528
      WBInteraction000413050
      WBInteraction000413284
      WBInteraction000423226
      WBInteraction000426026
      WBInteraction000431360
      WBInteraction000445510
      WBInteraction000454486
      WBInteraction000457397
      WBInteraction000523900
  Map_info: Map: X Position: -19.6807 Error: 0.009023
    Positive: Positive_clone: F57C12 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00027309
    WBPaper00034018
    WBPaper00034761
    WBPaper00041549
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene