WormBase Tree Display for Gene: WBGene00001937
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WBGene00001937 | SMap | S_parent | Sequence | F22B3 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | his | |||||
Allele (13) | ||||||
RNASeq_FPKM (74) | ||||||
GO_annotation | 00109756 | |||||
00109757 | ||||||
00109758 | ||||||
00109759 | ||||||
Ortholog (155) | ||||||
Paralog (22) | ||||||
Structured_description | Concise_description | his-63 encodes an H3 histone; by homology, HIS-63 is predicted to function as a nucleosome component required for packaging of DNA into chromatin; his-63 is a replication-dependent histone locus. | Paper_evidence | WBPaper00005142 | ||
Curator_confirmed | WBPerson1843 | |||||
WBPerson567 | ||||||
Date_last_updated | 17 Jun 2004 00:00:00 | |||||
Automated_description | Predicted to enable DNA binding activity and protein heterodimerization activity. Predicted to be a structural constituent of chromatin. Predicted to be part of nucleosome. Is an ortholog of several human genes including H3C1 (H3 clustered histone 1); H3C3 (H3 clustered histone 3); and H3C4 (H3 clustered histone 4). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | F22B3.2 | ||||
Corresponding_transcript | F22B3.2.1 | |||||
Other_sequence (19) | ||||||
Associated_feature | WBsf652212 | |||||
WBsf997831 | ||||||
WBsf1018204 | ||||||
WBsf1018205 | ||||||
WBsf230877 | ||||||
Experimental_info | RNAi_result (14) | |||||
Expr_pattern | Expr1149200 | |||||
Expr1200195 | ||||||
Expr2012472 | ||||||
Expr2030711 | ||||||
Drives_construct | WBCnstr00036578 | |||||
Construct_product | WBCnstr00018892 | |||||
WBCnstr00036578 | ||||||
Microarray_results | SMD_F22B3.2 | |||||
172788_x_at | ||||||
A_12_P114711 | ||||||
Aff_F22B3.2 | ||||||
GPL8304_CE_WBGene00001937_C | ||||||
GPL8673_F22B3_2P00154 | ||||||
Expression_cluster (124) | ||||||
Interaction (198) | ||||||
Map_info | Map | IV | Position | 4.97818 | ||
Positive | Positive_clone | F22B3 | Inferred_automatically | From CDS info | ||
From sequence, transcript, pseudogene data | ||||||
Pseudo_map_position | ||||||
Reference | WBPaper00038491 | |||||
WBPaper00040135 | ||||||
WBPaper00049828 | ||||||
WBPaper00055090 | ||||||
WBPaper00057312 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||
Method | Gene |