WormBase Tree Display for Gene: WBGene00001889
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| WBGene00001889 | SMap | S_parent | Sequence | ZK131 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | his-15 | Person_evidence | WBPerson160 | |||||
| Sequence_name | ZK131.9 | ||||||||
| Molecular_name | ZK131.9 | ||||||||
| ZK131.9.1 | |||||||||
| CE07075 | |||||||||
| Other_name | CELE_ZK131.9 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | his-15 | ||||||||
| DB_info | Database | AceView | gene | 2O109 | |||||
| WormFlux | gene | WBGene00001889 | |||||||
| NDB | locus_tag | CELE_ZK131.9 | |||||||
| NCBI | gene | 175026 | |||||||
| RefSeq | protein | NM_064487.1 | |||||||
| SwissProt | UniProtAcc | P04255 | |||||||
| UniProt_GCRP | UniProtAcc | P04255 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:26 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | his | ||||||||
| Allele | WBVar01499702 | ||||||||
| WBVar01498435 | |||||||||
| WBVar01498941 | |||||||||
| Legacy_information | [C.elegansII] NMK. Histone type H2B. HIS3 cluster. [Roberts et al. 1989; EM] | ||||||||
| In_cluster | HIS3_cluster | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00106123 | ||||||||
| 00109582 | |||||||||
| 00109583 | |||||||||
| 00109584 | |||||||||
| 00109585 | |||||||||
| Ortholog (199) | |||||||||
| Paralog (16) | |||||||||
| Structured_description | Concise_description | his-15 encodes an H2B histone. | Curator_confirmed | WBPerson567 | |||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable DNA binding activity and protein heterodimerization activity. Predicted to be a structural constituent of chromatin. Involved in innate immune response. Predicted to be part of nucleosome. Is an ortholog of several human genes including H2BC12 (H2B clustered histone 12); H2BC17 (H2B clustered histone 17); and H2BC3 (H2B clustered histone 3). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | ZK131.9 | |||||||
| Corresponding_transcript | ZK131.9.1 | ||||||||
| Other_sequence | MC00785 | ||||||||
| MCC03885_1 | |||||||||
| GO252435.1 | |||||||||
| GO251777.1 | |||||||||
| Associated_feature | WBsf222394 | ||||||||
| Experimental_info | RNAi_result (17) | ||||||||
| Expr_pattern | Expr1162657 | ||||||||
| Microarray_results (24) | |||||||||
| Expression_cluster (113) | |||||||||
| SAGE_tag | SAGE:gctttggaggaaactcc | Strand | Antisense | ||||||
| SAGE:aactcttttg | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| SAGE:aactcttttgtcaacga | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| SAGE:acgtctcttctttccgt | Strand | Antisense | |||||||
| SAGE:acgtctcttc | Strand | Antisense | |||||||
| Interaction (207) | |||||||||
| Map_info (3) | |||||||||
| Reference | WBPaper00001150 | ||||||||
| WBPaper00005142 | |||||||||
| WBPaper00005182 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00057125 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
