WormBase Tree Display for Gene: WBGene00001884
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| WBGene00001884 | SMap | S_parent | Sequence | ZK131 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | his-10 | Person_evidence | WBPerson160 | |||||
| Sequence_name | ZK131.4 | ||||||||
| Molecular_name | ZK131.4 | ||||||||
| ZK131.4.1 | |||||||||
| CE03252 | |||||||||
| Other_name | CELE_ZK131.4 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | his-10 | ||||||||
| DB_info | Database | AceView | gene | 2O114 | |||||
| WormFlux | gene | WBGene00001884 | |||||||
| NDB | locus_tag | CELE_ZK131.4 | |||||||
| NCBI | gene | 191671 | |||||||
| RefSeq | protein | NM_064492.1 | |||||||
| SwissProt | UniProtAcc | P62784 | |||||||
| UniProt_GCRP | UniProtAcc | P62784 | |||||||
| OMIM | gene | 602826 | |||||||
| 602827 | |||||||||
| 602830 | |||||||||
| 602833 | |||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:26 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | his | ||||||||
| Allele | WBVar01499702 | ||||||||
| WBVar01498435 | |||||||||
| WBVar01498941 | |||||||||
| Legacy_information | [C.elegansII] NMK. Histone type H4. HIS3 cluster. [Roberts et al. 1989; EM] | ||||||||
| In_cluster | HIS3_cluster | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00106118 | ||||||||
| 00106119 | |||||||||
| 00106120 | |||||||||
| 00109564 | |||||||||
| 00109565 | |||||||||
| 00109566 | |||||||||
| Ortholog (89) | |||||||||
| Paralog (15) | |||||||||
| Structured_description | Concise_description | his-10 encodes an H4 histone. | Curator_confirmed | WBPerson567 | |||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable DNA binding activity and protein heterodimerization activity. Predicted to be a structural constituent of chromatin. Involved in defense response to Gram-negative bacterium and innate immune response. Is an ortholog of several human genes including H4C1 (H4 clustered histone 1); H4C4 (H4 clustered histone 4); and H4C9 (H4 clustered histone 9). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | EFO:MONDO:0031400 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:4785,HGNC:4787,HGNC:4790,HGNC:4793) | ||||
| Molecular_info | Corresponding_CDS | ZK131.4 | |||||||
| Corresponding_transcript | ZK131.4.1 | ||||||||
| Other_sequence (15) | |||||||||
| Associated_feature | WBsf224211 | ||||||||
| Experimental_info | RNAi_result (12) | ||||||||
| Expr_pattern | Expr1162652 | ||||||||
| Drives_construct | WBCnstr00036627 | ||||||||
| Construct_product | WBCnstr00036627 | ||||||||
| Microarray_results (2) | |||||||||
| Expression_cluster (137) | |||||||||
| Interaction (261) | |||||||||
| Map_info | Map | II | Position | 20.31 | |||||
| Positive | Positive_clone | LCEH3 | |||||||
| ZK131 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||||
| Pseudo_map_position | |||||||||
| Reference (11) | |||||||||
| Remark | cannot be sequence C50F4.7 on V. removing [sdm 000920] | ||||||||
| cannot be sequence K03A1.6 on X. removing [sdm 000920] | |||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
