WormBase Tree Display for Gene: WBGene00001884
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WBGene00001884 | SMap | S_parent | Sequence | ZK131 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | his | |||||
Allele | WBVar01499702 | |||||
WBVar01498435 | ||||||
WBVar01498941 | ||||||
Legacy_information | [C.elegansII] NMK. Histone type H4. HIS3 cluster. [Roberts et al. 1989; EM] | |||||
In_cluster | HIS3_cluster | |||||
RNASeq_FPKM (74) | ||||||
GO_annotation | 00106118 | |||||
00106119 | ||||||
00106120 | ||||||
00109564 | ||||||
00109565 | ||||||
00109566 | ||||||
Ortholog (89) | ||||||
Paralog (15) | ||||||
Structured_description | Concise_description | his-10 encodes an H4 histone. | Curator_confirmed | WBPerson567 | ||
Date_last_updated | 17 Jun 2004 00:00:00 | |||||
Automated_description | Predicted to enable DNA binding activity and protein heterodimerization activity. Predicted to be a structural constituent of chromatin. Involved in defense response to Gram-negative bacterium and innate immune response. Is an ortholog of several human genes including H4C1 (H4 clustered histone 1); H4C4 (H4 clustered histone 4); and H4C9 (H4 clustered histone 9). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Disease_info | Potential_model | EFO:MONDO:0031400 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:4785,HGNC:4787,HGNC:4790,HGNC:4793) | |
Molecular_info | Corresponding_CDS | ZK131.4 | ||||
Corresponding_transcript | ZK131.4.1 | |||||
Other_sequence (15) | ||||||
Associated_feature | WBsf224211 | |||||
Experimental_info | RNAi_result (12) | |||||
Expr_pattern | Expr1162652 | |||||
Drives_construct | WBCnstr00036627 | |||||
Construct_product | WBCnstr00036627 | |||||
Microarray_results | 190307_s_at | |||||
Aff_ZK131.1 | ||||||
Expression_cluster (137) | ||||||
Interaction (261) | ||||||
Map_info | Map | II | Position | 20.31 | ||
Positive | Positive_clone | LCEH3 | ||||
ZK131 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Pseudo_map_position | ||||||
Reference (11) | ||||||
Remark | cannot be sequence C50F4.7 on V. removing [sdm 000920] | |||||
cannot be sequence K03A1.6 on X. removing [sdm 000920] | ||||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |