WormBase Tree Display for Gene: WBGene00001841
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| WBGene00001841 | Evidence | CGC_data_submission | |||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | C36B7 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | hen-1 | Person_evidence | WBPerson309 | |||||
| Sequence_name | C36B7.7 | ||||||||
| Molecular_name | C36B7.7 | ||||||||
| C36B7.7.1 | |||||||||
| CE04178 | |||||||||
| Other_name | CELE_C36B7.7 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | hen-1 | ||||||||
| DB_info | Database | AceView | gene | XH732 | |||||
| WormQTL | gene | WBGene00001841 | |||||||
| WormFlux | gene | WBGene00001841 | |||||||
| NDB | locus_tag | CELE_C36B7.7 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00001841|UniProtKB=G5ECA8 | |||||||
| family | PTHR21105 | ||||||||
| NCBI | gene | 191666 | |||||||
| RefSeq | protein | NM_076799.7 | |||||||
| TREEFAM | TREEFAM_ID | TF318904 | |||||||
| TrEMBL | UniProtAcc | G5ECA8 | |||||||
| UniProt_GCRP | UniProtAcc | G5ECA8 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:25 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | hen | ||||||||
| Allele (200) | |||||||||
| Strain | WBStrain00022193 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (11) | |||||||||
| Ortholog (11) | |||||||||
| Paralog | WBGene00020505 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | hen-1 encodes a secreted protein that contains a low-density lipoprotein (LDL) receptor motif A; HEN-1 activity is required for integration of sensory stimuli and behavioral plasticity; a hen-1::GFP reporter is expressed in pharyngeal muscles, the vulva, and weakly in a subset of neurons; antibodies to HEN-1 protein detect expression exclusively in the AIY and ASE neurons, where HEN-1 appears to localize to cell bodies and in a punctate pattern in nerve ring axons at sites of synapse formation; HEN-1 expression in AIY appears to be under the control of the TTX-3 LIM domain transcription factor. | Paper_evidence | WBPaper00004727 | |||||
| WBPaper00005300 | |||||||||
| Curator_confirmed | WBPerson48 | ||||||||
| WBPerson1843 | |||||||||
| Date_last_updated | 06 Nov 2007 00:00:00 | ||||||||
| Automated_description | Predicted to enable transmembrane receptor protein tyrosine kinase activator activity. Involved in dauer larval development and nervous system process. Located in axon and neuronal cell body. Expressed in neurons; pharyngeal muscle cell; and vulva. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C36B7.7 | |||||||
| Corresponding_transcript | C36B7.7.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00042048 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00011685 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00029605 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1911 | ||||||||
| Expr1912 | |||||||||
| Expr4411 | |||||||||
| Expr1017068 | |||||||||
| Expr1146048 | |||||||||
| Expr2012397 | |||||||||
| Expr2030633 | |||||||||
| Marker48 | |||||||||
| Drives_construct | WBCnstr00004840 | ||||||||
| WBCnstr00010515 | |||||||||
| WBCnstr00011976 | |||||||||
| WBCnstr00036653 | |||||||||
| Construct_product | WBCnstr00036653 | ||||||||
| Antibody | WBAntibody00000523 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (165) | |||||||||
| Interaction (24) | |||||||||
| Anatomy_function | WBbtf0093 | ||||||||
| WBbtf0094 | |||||||||
| WBbtf0095 | |||||||||
| WBbtf0096 | |||||||||
| WBbtf0097 | |||||||||
| WBbtf0098 | |||||||||
| WBbtf0099 | |||||||||
| WBbtf0100 | |||||||||
| Map_info | Map | X | Position | -1.85356 | Error | 0.009919 | |||
| Positive | Positive_clone | C36B7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 4400 | |||||||
| Pseudo_map_position | |||||||||
| Reference (47) | |||||||||
| Remark | Sequence connection from [Katsura I] | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
