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WormBase Tree Display for Gene: WBGene00001817

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Name Class

WBGene00001817SMapS_parentSequenceY50E8A
IdentityVersion1
NameCGC_namehaf-7Person_evidenceWBPerson36
Sequence_nameY50E8A.16
Molecular_nameY50E8A.16
Y50E8A.16.1
CE24404
Other_nameCELE_Y50E8A.16Accession_evidenceNDBBX284605
Public_namehaf-7
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:25WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classhaf
AlleleWBVar01873709
WBVar01843122
WBVar00477636
WBVar00477637
WBVar00477638
WBVar00477639
WBVar00477640
WBVar00477641
WBVar00477642
WBVar02122676
WBVar00145501
WBVar01744565
WBVar01744566
WBVar01744567
WBVar01775501
WBVar01775502
WBVar01069690
WBVar01069691
WBVar01069692
WBVar01069693
WBVar01069694
WBVar01069695
WBVar01069696
WBVar01069697
WBVar01069698
WBVar01069699
WBVar01069700
WBVar01069701
WBVar01069702
WBVar01590491
WBVar01463115
WBVar01069703
WBVar01069704
WBVar01069705
WBVar01069706
WBVar00017105
WBVar01069707
WBVar01069708
WBVar01069709
WBVar00017110
WBVar01069710
WBVar01069711
WBVar00017115
WBVar01069712
WBVar01069713
WBVar01069714
WBVar00017120
WBVar01069715
WBVar01069716
WBVar01069717
WBVar01069718
WBVar01069719
WBVar01069720
WBVar01069721
WBVar01819453
WBVar01069722
WBVar01069723
WBVar01069724
WBVar01069725
WBVar01069726
WBVar01069727
WBVar01069728
WBVar01069729
WBVar01069730
WBVar01069731
WBVar02124053
WBVar01489170
WBVar01500212
WBVar01500213
WBVar01499299
WBVar02144026
WBVar00597621
WBVar01499316
WBVar01499698
StrainWBStrain00001127
WBStrain00003342
WBStrain00035520
RNASeq_FPKM (74)
GO_annotation (12)
Ortholog (33)
Paralog (23)
Structured_descriptionAutomated_descriptionPredicted to enable ATPase-coupled transmembrane transporter activity. Predicted to be involved in transmembrane transport. Predicted to be located in membrane. Expressed in tail. Human ortholog(s) of this gene implicated in several diseases, including Alzheimer's disease; autoimmune disease (multiple); bronchial disease (multiple); and systemic scleroderma (multiple). Is an ortholog of human TAP2 (transporter 2, ATP binding cassette subfamily B member).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_model (27)
Molecular_info (4)
Experimental_infoRNAi_resultWBRNAi00078231Inferred_automaticallyRNAi_primary
WBRNAi00057102Inferred_automaticallyRNAi_primary
WBRNAi00037332Inferred_automaticallyRNAi_primary
Expr_patternChronogram1029
Expr3349
Expr7026
Expr7027
Expr1019968
Expr1031066
Expr1160547
Expr2012360
Expr2030596
Drives_constructWBCnstr00002010
WBCnstr00003813
WBCnstr00011345
WBCnstr00036670
Construct_productWBCnstr00011345
WBCnstr00016461
WBCnstr00036670
Microarray_results (18)
Expression_cluster (200)
Interaction (28)
Map_infoMapVPosition6.81155Error0.012118
PositivePositive_cloneY50E8AInferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Mapping_dataMulti_point4978
5289
Pseudo_map_position
ReferenceWBPaper00025092
WBPaper00027644
WBPaper00028961
WBPaper00028970
WBPaper00031484
WBPaper00038491
WBPaper00055090
RemarkSequence connection from Sheps JA and Baillie DL [021008 ck1]
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene