WormBase Tree Display for Gene: WBGene00001671
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| WBGene00001671 | SMap | S_parent | Sequence | F56H9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | gpa-9 | Person_evidence | WBPerson625 | |||||
| Sequence_name | F56H9.4 | ||||||||
| Molecular_name | F56H9.4b | ||||||||
| F56H9.4a | |||||||||
| CE46135 | |||||||||
| F56H9.4b.1 | |||||||||
| Other_name | CELE_F56H9.4 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | gpa-9 | ||||||||
| DB_info | Database | AceView | gene | 5N126 | |||||
| WormQTL | gene | WBGene00001671 | |||||||
| WormFlux | gene | WBGene00001671 | |||||||
| NDB | locus_tag | CELE_F56H9.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00001671|UniProtKB=Q20910 | |||||||
| family | PTHR10218 | ||||||||
| NCBI | gene | 191659 | |||||||
| RefSeq | protein | NM_001269515.3 | |||||||
| NR_132533.1 | |||||||||
| SwissProt | UniProtAcc | Q20910 | |||||||
| UniProt_GCRP | UniProtAcc | Q20910 | |||||||
| RNAcentral | URSid | URS00008553BF | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:25 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | gpa | ||||||||
| Allele (73) | |||||||||
| Strain | WBStrain00028938 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (12) | |||||||||
| Ortholog | WBGene00190007 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | |||||
| CBOVI.g1565 | Caenorhabditis bovis | From_analysis | WormBase-Compara | ||||||
| CSP21.g15358 | Caenorhabditis parvicauda | From_analysis | WormBase-Compara | ||||||
| CSP31.g16405 | Caenorhabditis uteleia | From_analysis | WormBase-Compara | ||||||
| CSP32.g16183 | Caenorhabditis sulstoni | From_analysis | WormBase-Compara | ||||||
| CSP38.g19080 | Caenorhabditis quiockensis | From_analysis | WormBase-Compara | ||||||
| OTIPU.nOt.2.0.1.g09977 | Oscheius tipulae | From_analysis | WormBase-Compara | ||||||
| chrV_pilon.g16063 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00137512 | Caenorhabditis japonica | From_analysis | WormBase-Compara | ||||||
| WBGene00091629 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| Paralog (21) | |||||||||
| Structured_description | Concise_description | gpa-9 encodes a member of the G protein alpha subunit family of heterotrimeric GTPases; it is expressed in ASJ, PHB, PVQ, pharyngeal muscle, and the spermatheca. | Curator_confirmed | WBPerson48 | |||||
| WBPerson567 | |||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable G protein-coupled receptor binding activity; G-protein beta/gamma-subunit complex binding activity; and GTPase activity. Predicted to be involved in adenylate cyclase-modulating G protein-coupled receptor signaling pathway. Predicted to be part of heterotrimeric G-protein complex. Expressed in ASJ; lumbar neurons; pharyngeal muscle cell; and spermatheca. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F56H9.4b | |||||||
| Corresponding_CDS_history | F56H9.4:wp227 | ||||||||
| F56H9.4a:wp245 | |||||||||
| Corresponding_transcript | F56H9.4a | ||||||||
| F56H9.4b.1 | |||||||||
| Associated_feature | WBsf669515 | ||||||||
| WBsf669516 | |||||||||
| WBsf234706 | |||||||||
| WBsf234707 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00048793 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00015855 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1309 | ||||||||
| Expr1020000 | |||||||||
| Expr1152542 | |||||||||
| Expr2012197 | |||||||||
| Expr2030433 | |||||||||
| Drives_construct | WBCnstr00001690 | ||||||||
| WBCnstr00005980 | |||||||||
| WBCnstr00008000 | |||||||||
| WBCnstr00008453 | |||||||||
| WBCnstr00008454 | |||||||||
| WBCnstr00015704 | |||||||||
| WBCnstr00020259 | |||||||||
| WBCnstr00036785 | |||||||||
| Construct_product | WBCnstr00001690 | ||||||||
| WBCnstr00010205 | |||||||||
| WBCnstr00036785 | |||||||||
| Microarray_results (14) | |||||||||
| Expression_cluster (153) | |||||||||
| Interaction (34) | |||||||||
| WBProcess | WBbiopr:00000039 | ||||||||
| Map_info | Map | V | Position | 4.57585 | Error | 0.013492 | |||
| Positive | Positive_clone | F56H9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 4374 | |||||||
| 4375 | |||||||||
| Pseudo_map_position | |||||||||
| Reference (19) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
