WormBase Tree Display for Gene: WBGene00001661

WBGene00001661 SMap: S_parent: Sequence: C34E10
  Identity: Version: 1
    Name: CGC_name: gop-2 Person_evidence: WBPerson247
      Sequence_name: C34E10.2
      Molecular_name: C34E10.2
        C34E10.2.1
        CE01182
      Other_name: CELE_C34E10.2 Accession_evidence: NDB BX284603
      Public_name: gop-2
    DB_info: Database (12)
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:25 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: gop
    Allele (12)
    Strain: WBStrain00047681
      WBStrain00055518
    RNASeq_FPKM (74)
    GO_annotation: 00046496
      00046497
      00046498
      00046499
      00046500
      00046501
      00046502
      00046503
      00046504
      00046505
    Contained_in_operon: CEOP3272
    Ortholog: WBGene00040027 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00153801 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00075429 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00101954 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00218670 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00123371 Caenorhabditis japonica From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00234122 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g5236 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g5625 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g6708 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g19757 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g3699 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g20837 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g12171 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g2682 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g12972 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g1581 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g7833 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00692.g13485 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-gop-2 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g12537 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_03523.g30466 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_06187 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_008452 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g12939 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g19871 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_30023820 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIII_pilon.g7676 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00212003 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00245421 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00261330 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00293361 Trichuris muris From_analysis: WormBase-Compara
      SGD:S000003833 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      FB:FBgn0040346 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-040801-154 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      HGNC:17030 Homo sapiens From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1921504 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      RGD:1589985 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
    Paralog: WBGene00013550 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00015029 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Concise_description: gop-2 encodes a member of the conserved hypothetical ATP binding protein family that affects embryonic viability, growth, and fertility. Paper_evidence: WBPaper00004403
            WBPaper00005330
            WBPaper00005654
          Curator_confirmed: WBPerson48
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Predicted to enable GTPase activity. Predicted to be located in cytoplasm and nucleus. Is an ortholog of human GPN1 (GPN-loop GTPase 1). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C34E10.2
    Corresponding_transcript: C34E10.2.1
    Other_sequence (51)
    Associated_feature: WBsf224894
  Experimental_info: RNAi_result (19)
    Expr_pattern: Expr1011297
      Expr1030994
      Expr1145899
      Expr2012174
      Expr2030410
    Drives_construct: WBCnstr00036794
    Construct_product: WBCnstr00036794
    Microarray_results (20)
    Expression_cluster (101)
    Interaction (58)
  Map_info: Map: III Position: -1.8553 Error: 0.00036
    Positive: Positive_clone: C34E10 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00048493
    WBPaper00055090
    WBPaper00061547
  Remark: Gene crated on basis of AY052770 [020823 krb]
    Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene