WormBase Tree Display for Gene: WBGene00001570
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| WBGene00001570 | Evidence | CGC_data_submission | |||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | CHROMOSOME_III | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | gei-13 | Person_evidence | WBPerson1796 | |||||
| Sequence_name | F58A4.11 | ||||||||
| Molecular_name | F58A4.11 | ||||||||
| F58A4.11.1 | |||||||||
| CE40812 | |||||||||
| Other_name | CELE_F58A4.11 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | gei-13 | ||||||||
| DB_info | Database | AceView | gene | 3K722 | |||||
| WormQTL | gene | WBGene00001570 | |||||||
| WormFlux | gene | WBGene00001570 | |||||||
| NDB | locus_tag | CELE_F58A4.11 | |||||||
| NCBI | gene | 176364 | |||||||
| RefSeq | protein | NM_066733.5 | |||||||
| SwissProt | UniProtAcc | P34478 | |||||||
| TREEFAM | TREEFAM_ID | TF318782 | |||||||
| UniProt_GCRP | UniProtAcc | P34478 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:24 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | gei | ||||||||
| Allele (61) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00042609 | ||||||||
| 00042610 | |||||||||
| 00042611 | |||||||||
| 00042612 | |||||||||
| 00042613 | |||||||||
| Ortholog (26) | |||||||||
| Structured_description | Concise_description | gei-13 encodes a protein, with a BED finger domain (predicted to be DNA-binding) and a glutamine/asparagine-rich domain; GEI-13 physically interacts with GEX-3, and is required for normal body shape, cuticle synthesis, and locomotion. | Paper_evidence | WBPaper00005068 | |||||
| WBPaper00005194 | |||||||||
| WBPaper00005654 | |||||||||
| WBPaper00012788 | |||||||||
| WBPaper00012830 | |||||||||
| WBPaper00012882 | |||||||||
| WBPaper00012897 | |||||||||
| WBPaper00013003 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable metal ion binding activity. Predicted to be involved in negative regulation of transcription elongation by RNA polymerase II. Predicted to be part of NELF complex. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F58A4.11 | |||||||
| Corresponding_CDS_history | F58A4.11:wp173 | ||||||||
| Corresponding_transcript | F58A4.11.1 | ||||||||
| Other_sequence | CR07422 | ||||||||
| Dviv_isotig33852 | |||||||||
| Dviv_isotig13680 | |||||||||
| GR12422 | |||||||||
| CRC03100_1 | |||||||||
| CRC01146_1 | |||||||||
| Dviv_isotig13679 | |||||||||
| GRC01314_1 | |||||||||
| JI165728.1 | |||||||||
| Name_isotig00406 | |||||||||
| Associated_feature (28) | |||||||||
| Experimental_info | RNAi_result (24) | ||||||||
| Expr_pattern | Expr1016446 | ||||||||
| Expr1030939 | |||||||||
| Expr1152665 | |||||||||
| Expr2012008 | |||||||||
| Expr2030244 | |||||||||
| Drives_construct | WBCnstr00036856 | ||||||||
| Construct_product | WBCnstr00036856 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (247) | |||||||||
| Interaction (43) | |||||||||
| Map_info | Map | III | Position | 0.844062 | Error | 0.007693 | |||
| Positive | Positive_clone | F58A4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00005194 | ||||||||
| WBPaper00041549 | |||||||||
| WBPaper00051737 | |||||||||
| WBPaper00064212 | |||||||||
| Remark | Sequence connection from [Qadota H, Kaibuchi K] | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
