WormBase Tree Display for Gene: WBGene00001570
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WBGene00001570 | Evidence | CGC_data_submission | |||||
---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | CHROMOSOME_III | ||||
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | gei | ||||||
Allele (61) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00042609 | ||||||
00042610 | |||||||
00042611 | |||||||
00042612 | |||||||
00042613 | |||||||
Ortholog (26) | |||||||
Structured_description | Concise_description | gei-13 encodes a protein, with a BED finger domain (predicted to be DNA-binding) and a glutamine/asparagine-rich domain; GEI-13 physically interacts with GEX-3, and is required for normal body shape, cuticle synthesis, and locomotion. | Paper_evidence | WBPaper00005068 | |||
WBPaper00005194 | |||||||
WBPaper00005654 | |||||||
WBPaper00012788 | |||||||
WBPaper00012830 | |||||||
WBPaper00012882 | |||||||
WBPaper00012897 | |||||||
WBPaper00013003 | |||||||
Curator_confirmed | WBPerson567 | ||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||
Automated_description | Predicted to enable metal ion binding activity. Predicted to be involved in negative regulation of transcription elongation by RNA polymerase II. Predicted to be part of NELF complex. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F58A4.11 | |||||
Corresponding_CDS_history | F58A4.11:wp173 | ||||||
Corresponding_transcript | F58A4.11.1 | ||||||
Other_sequence | CR07422 | ||||||
Dviv_isotig33852 | |||||||
Dviv_isotig13680 | |||||||
GR12422 | |||||||
CRC03100_1 | |||||||
CRC01146_1 | |||||||
Dviv_isotig13679 | |||||||
GRC01314_1 | |||||||
JI165728.1 | |||||||
Name_isotig00406 | |||||||
Associated_feature (28) | |||||||
Experimental_info | RNAi_result (24) | ||||||
Expr_pattern | Expr1016446 | ||||||
Expr1030939 | |||||||
Expr1152665 | |||||||
Expr2012008 | |||||||
Expr2030244 | |||||||
Drives_construct | WBCnstr00036856 | ||||||
Construct_product | WBCnstr00036856 | ||||||
Microarray_results (19) | |||||||
Expression_cluster (247) | |||||||
Interaction (43) | |||||||
Map_info | Map | III | Position | 0.844062 | Error | 0.007693 | |
Positive | Positive_clone | F58A4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00005194 | ||||||
WBPaper00041549 | |||||||
WBPaper00051737 | |||||||
WBPaper00064212 | |||||||
Remark | Sequence connection from [Qadota H, Kaibuchi K] | ||||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||
Method | Gene |