WormBase Tree Display for Gene: WBGene00001517
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| WBGene00001517 | SMap | S_parent | Sequence | C15B12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | gar-1 | Person_evidence | WBPerson32 | |||||
| Sequence_name | C15B12.5 | ||||||||
| Molecular_name (15) | |||||||||
| Other_name | acm-1 | ||||||||
| CELE_C15B12.5 | Accession_evidence | NDB | BX284606 | ||||||
| Public_name | gar-1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:24 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | gar | ||||||||
| Allele (74) | |||||||||
| Strain | WBStrain00031608 | ||||||||
| WBStrain00035854 | |||||||||
| WBStrain00022221 | |||||||||
| WBStrain00022222 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (26) | |||||||||
| Ortholog (31) | |||||||||
| Paralog (20) | |||||||||
| Structured_description | Concise_description | gar-1 encodes a G protein-linked muscarinic acetylcholine receptor; though gar-1 is most closely related to muscarinic acetylcholine receptors (mAChR), it is pharmacologically distinct from them in its response to certain ligands; gar-1 gene transcripts are expressed at all developmental stages; the GAR-1-GFP fusion protein is expressed in some head neurons and in the PVM neuron; electrophysiological studies indicate that gar-1 couples to the inhibitory subunit of G proteins and not to Gs or to Go/Gq. | Paper_evidence | WBPaper00003318 | |||||
| WBPaper00003934 | |||||||||
| WBPaper00004388 | |||||||||
| WBPaper00005000 | |||||||||
| Curator_confirmed | WBPerson324 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Enables G protein-coupled acetylcholine receptor activity. Involved in cholinergic synaptic transmission. Located in postsynaptic membrane. Expressed in PVM and head neurons. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C15B12.5a | |||||||
| C15B12.5b | |||||||||
| C15B12.5c | |||||||||
| C15B12.5d | |||||||||
| C15B12.5e | |||||||||
| Corresponding_transcript | C15B12.5a.1 | ||||||||
| C15B12.5b.1 | |||||||||
| C15B12.5c.1 | |||||||||
| C15B12.5d.1 | |||||||||
| C15B12.5e.1 | |||||||||
| Other_sequence | JI172500.1 | ||||||||
| ASC02740_1 | |||||||||
| JI168572.1 | |||||||||
| MI08383 | |||||||||
| FJ609744.1 | |||||||||
| FJ609743.1 | |||||||||
| Dviv_isotig25020 | |||||||||
| AS01817 | |||||||||
| Associated_feature | WBsf1005578 | ||||||||
| WBsf1005579 | |||||||||
| WBsf1023102 | |||||||||
| WBsf1023103 | |||||||||
| WBsf237489 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00075430 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00010779 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00040586 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr981 | ||||||||
| Expr1115 | |||||||||
| Expr1011911 | |||||||||
| Expr1144640 | |||||||||
| Expr2011944 | |||||||||
| Expr2030181 | |||||||||
| Drives_construct | WBCnstr00010086 | ||||||||
| WBCnstr00036894 | |||||||||
| Construct_product | WBCnstr00036894 | ||||||||
| Microarray_results (34) | |||||||||
| Expression_cluster (146) | |||||||||
| Interaction (14) | |||||||||
| Map_info | Map | X | Position | -2.89315 | Error | 0.001766 | |||
| Positive | Positive_clone | C15B12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference (23) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
