WormBase Tree Display for Gene: WBGene00001489
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| WBGene00001489 | SMap | S_parent | Sequence | T04C9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | frm-2 | Person_evidence | WBPerson204 | |||||
| Sequence_name | T04C9.6 | ||||||||
| Molecular_name | T04C9.6a | ||||||||
| T04C9.6a.1 | |||||||||
| CE29463 | |||||||||
| T04C9.6b | |||||||||
| CE39274 | |||||||||
| T04C9.6a.2 | |||||||||
| T04C9.6a.3 | |||||||||
| T04C9.6a.4 | |||||||||
| T04C9.6b.1 | |||||||||
| Other_name | CELE_T04C9.6 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | frm-2 | ||||||||
| DB_info | Database | WormQTL | gene | WBGene00001489 | |||||
| WormFlux | gene | WBGene00001489 | |||||||
| NDB | locus_tag | CELE_T04C9.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00001489|UniProtKB=H2KZV9 | |||||||
| family | PTHR23280 | ||||||||
| NCBI | gene | 175848 | |||||||
| RefSeq | protein | NM_001392115.1 | |||||||
| NM_001047405.6 | |||||||||
| TREEFAM | TREEFAM_ID | TF319780 | |||||||
| TrEMBL | UniProtAcc | H2KZV9 | |||||||
| Q9GP93 | |||||||||
| UniProt_GCRP | UniProtAcc | H2KZV9 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:24 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | frm | ||||||||
| Allele (76) | |||||||||
| Strain | WBStrain00052074 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00022587 | ||||||||
| 00022588 | |||||||||
| 00022589 | |||||||||
| 00108785 | |||||||||
| Ortholog (40) | |||||||||
| Paralog | WBGene00001488 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00001491 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00001333 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable cytoskeletal protein binding activity. Predicted to be involved in actomyosin structure organization. Predicted to be located in cytoskeleton. Expressed in intestinal cell; pharyngeal epithelial cell; and sensory neurons. Is an ortholog of human EPB41L4B (erythrocyte membrane protein band 4.1 like 4B) and EPB41L5 (erythrocyte membrane protein band 4.1 like 5). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T04C9.6a | |||||||
| T04C9.6b | |||||||||
| Corresponding_CDS_history | T04C9.6:wp150 | ||||||||
| Corresponding_transcript | T04C9.6a.1 | ||||||||
| T04C9.6a.2 | |||||||||
| T04C9.6a.3 | |||||||||
| T04C9.6a.4 | |||||||||
| T04C9.6b.1 | |||||||||
| Other_sequence (18) | |||||||||
| Associated_feature (17) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00052383 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00035134 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00052384 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00114827 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00018140 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00005371 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00077328 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00006806 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr6604 | ||||||||
| Expr14776 | |||||||||
| Expr14777 | |||||||||
| Expr1023863 | |||||||||
| Expr1030890 | |||||||||
| Expr1156009 | |||||||||
| Expr2011884 | |||||||||
| Expr2030122 | |||||||||
| Drives_construct | WBCnstr00004165 | ||||||||
| WBCnstr00036914 | |||||||||
| WBCnstr00041421 | |||||||||
| Construct_product | WBCnstr00036914 | ||||||||
| WBCnstr00041421 | |||||||||
| Microarray_results (26) | |||||||||
| Expression_cluster (174) | |||||||||
| Interaction | WBInteraction000187468 | ||||||||
| WBInteraction000311454 | |||||||||
| WBInteraction000314756 | |||||||||
| WBInteraction000450671 | |||||||||
| WBInteraction000543750 | |||||||||
| WBInteraction000543751 | |||||||||
| WBInteraction000543752 | |||||||||
| WBInteraction000543753 | |||||||||
| WBInteraction000543754 | |||||||||
| WBInteraction000556612 | |||||||||
| Map_info | Map | III | Position | -1.42755 | Error | 9.2e-05 | |||
| Positive | Positive_clone | T04C9 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00024261 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00048837 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00056081 | |||||||||
| Remark | data submitted by [Gobel V] | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
