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WormBase Tree Display for Gene: WBGene00001475

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Name Class

WBGene00001475SMapS_parentSequenceCHROMOSOME_V
IdentityVersion2
NameCGC_namefmi-1Person_evidenceWBPerson194
WBPerson481
Sequence_nameF15B9.7
Molecular_nameF15B9.7a
F15B9.7a.1
CE42459
F15B9.7b
CE50507
F15B9.7c
CE50392
F15B9.7b.1
F15B9.7c.1
Other_namecdh-6Person_evidenceWBPerson698
CELE_F15B9.7Accession_evidenceNDBBX284605
Public_namefmi-1
DB_infoDatabaseAceViewgene5N513
WormQTLgeneWBGene00001475
WormFluxgeneWBGene00001475
NDBlocus_tagCELE_F15B9.7
PanthergeneCAEEL|EnsemblGenome=WBGene00001475|UniProtKB=G5EDK5
familyPTHR24026
NCBIgene179788
RefSeqproteinNM_001313143.3
NM_001313142.3
NM_073855.6
SwissProtUniProtAccG5EDK5
UniProt_GCRPUniProtAccG5EDK5
OMIMgene604523
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:24WBPerson1971EventImportedInitial conversion from geneace
230 Sep 2009 14:20:01WBPerson1847EventAcquires_mergeWBGene00000398
Acquires_mergeWBGene00000398
StatusLive
Gene_info (9)
Disease_infoPotential_modelDOID:0050580Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:1850)
Molecular_infoCorresponding_CDSF15B9.7a
F15B9.7b
F15B9.7c
Corresponding_CDS_historyF15B9.7:wp138
F15B9.7:wp188
Corresponding_transcriptF15B9.7a.1
F15B9.7b.1
F15B9.7c.1
Other_sequenceCRC05304_1
JI163786.1
JI163891.1
CR04693
JI163835.1
JI163797.1
Associated_feature (36)
Experimental_infoRNAi_resultWBRNAi00066947Inferred_automaticallyRNAi_primary
WBRNAi00001265Inferred_automaticallyRNAi_primary
WBRNAi00101845Inferred_automaticallyRNAi_primary
WBRNAi00044701Inferred_automaticallyRNAi_primary
WBRNAi00000627Inferred_automaticallyRNAi_primary
WBRNAi00013361Inferred_automaticallyRNAi_primary
Expr_pattern (13)
Drives_construct (11)
Construct_product (11)
AntibodyWBAntibody00002321
Microarray_results (19)
Expression_clusterWBPaper00033065:cyc-1(RNAi)_upregulated
WBPaper00036375:enriched_in_PVD_OLL
WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
WBPaper00037950:A-class-motor-neurons_larva_enriched
WBPaper00037950:A-class-motor-neurons_larva_SelectivelyEnriched
WBPaper00037950:all-neurons_L2-larva_expressed
WBPaper00037950:BAG-neuron_blastula-embryo_expressed
WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
WBPaper00037950:coelomocytes_L2-larva_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00038438:D.coniospora_12hr_downregulated_RNAseq
WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
WBPaper00038438:P.lumniescens_24hr_upregulated_RNAseq
WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
WBPaper00040285:H2S_12hr_downregulated
WBPaper00042561:smg-2(RNAi)_downregulated
WBPaper00044260:1-methylnicotinamide_downregulated
WBPaper00044260:nicotic-acid_downregulated
WBPaper00044316:CH3HgCl_7.5uM_downregulated
WBPaper00044426:rotenone_24h_downregulated
WBPaper00044736:flat_dev_expression
WBPaper00045390:tunicamycin_downregulated
WBPaper00045390:ubc-9(RNAi)_downregulated
WBPaper00045420:fertilization_upregulated_transcript
WBPaper00045729:gld-2(RNAi)_downregulated
WBPaper00045861:set-2(ok952)_upregulated
WBPaper00045861:wdr-5(ok1417)_upregulated
WBPaper00046012:tdp-1(ok803)_upregulated
WBPaper00046121:ecdoderm_unique
WBPaper00046741:Garlic-Extract_upregulated_mRNA
WBPaper00047131:daf-2(e1370)_upregulated_hel-1(gk148684)-background
WBPaper00048690:gonad-male-biased
WBPaper00048988:neuron_enriched
WBPaper00048988:neuron_expressed
WBPaper00049377:MWCNT_upregulated
WBPaper00049495:starvation-refeeding_regulated
WBPaper00049498:npr-1(ur89)_regulated_4
WBPaper00049545:jmjd-3.1(+)_upregulated
WBPaper00049545:rgef-1p-jmjd-1.2(+)_upregulated
WBPaper00049942:HeatShock_upregulated_hsf-1(RNAi)
WBPaper00049954:BPS_upregulated
WBPaper00050163:chd-3(eh4);let-418(RNAi)_upregulated_24-cell-embryo
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050843:sesamin_downregulated
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050859:upregulated_pgl-1(ct131)_vs_control_day1-adult
WBPaper00050990:GABAergic-neuron_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00050990:NMDA-neuron_expressed
WBPaper00051388:Glucose-diet_upregulated
WBPaper00051404:alg-1(gk214)_upregulated
WBPaper00051404:alg-2(ok304)_upregulated
WBPaper00052884:emb-4(hc60)_upregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053295:lin-22(icb38)_upregulated
WBPaper00053295:lin-22(ot267)_upregulated
WBPaper00053295:lin-22(ot269)_upregulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053321:embryo-to-L1_downregulated_nos-1(gv5)nos-2(RNAi)_SMARTseq
WBPaper00053321:embryo-to-L1_downregulated_WT_SMARTseq
WBPaper00053321:lin-15B(RNAi)_downregulated_starved-L1_Truseq
WBPaper00053321:nos-1(gv5)nos-2(RNAi)_upregulated_starved-L1_Truseq
WBPaper00053321:PGCs_depleted_NuGen
WBPaper00053388:dauer_regulated_Cluster5
WBPaper00053606:N2_vs_elt-2(ca15);elt-7(tm840)_downregulated
WBPaper00053664:ins-11(tm1053)_upregulated
WBPaper00053713:Pheromone-induced_postdauer_vs_control_downregulated
WBPaper00053713:Starvation-induced_postdauer_vs_control_upregulated
WBPaper00053771:up_at_24h-NaCl
WBPaper00053771:up_at_dpy-7(e88)
WBPaper00054758:alg-1(gk204)_upregulated
WBPaper00055060:flr-1(RNAi)_upregulated
WBPaper00055226:ADR-2_target_N2
WBPaper00055334:DLC-1_interacting
WBPaper00055354:eat-2(ad1116)_upregulated
WBPaper00055354:Metformin_upregulated
WBPaper00055354:Psora-Allantoin_upregulated
WBPaper00055354:Rapamycin-Metformin_upregulated
WBPaper00055354:Rapamycin-Psora-Allantoin_upregulated
WBPaper00055354:Rapamycin-Rifampicin-Allantoin_upregulated
WBPaper00055354:Rapamycin-Rifampicin-Psora_upregulated
WBPaper00055354:Rapamycin-Rifampicin_upregulated
WBPaper00055354:Rifampicin-Allantoin_upregulated
WBPaper00055354:Rifampicin-Psora_upregulated
WBPaper00055354:Rifampicin_upregulated
WBPaper00055981:fog-2(q71)_downregulated
WBPaper00056039:ptl-1(ok621)_upregulated
WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
WBPaper00056090:E.faecalis_upregulated_N2
WBPaper00056139:soil-microbiota_upregulated
WBPaper00056165:MINA-1_interacting_mRNA
WBPaper00056167:Cry5B_upregulated
WBPaper00056169:rrf-3(pk1426)_upregulated_embryo
WBPaper00056218:daf-16(mu86)_downregulated_Day3
WBPaper00056275:P.aeruginosa_downregulated
WBPaper00056275:P.aeruginosa_downregulated_atf-7(qd22qd130)_dependent
WBPaper00056275:P.aeruginosa_downregulated_pmk-1(km25)_dependent
WBPaper00056443:DietaryRestriction_upregulated
WBPaper00056443:sek-1(km4)_upregulated
WBPaper00056619:CEPsh_enriched
WBPaper00056826:hmc_biased
WBPaper00056868:P.aeruginosa_upregulated_smallRNA
WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
WBPaper00057347:nhr-14(tm1473)_downreglated
WBPaper00058598:mex-1(or286)_upregulated
WBPaper00058598:mex-3(eu149)_upregulated
WBPaper00058678:DAF-12_upregulated_PVD
WBPaper00058711:skn-1(lax188)_upregulated
WBPaper00058725:sftb-1(cer6)_downregulated
WBPaper00059027:neuron-synapses_depleted
WBPaper00059421:daf-1(m40);daf-3(mgDf90)_downregulated
WBPaper00059421:daf-3(mgDf90)_downregulated
WBPaper00059471:EGL-43_interacting
WBPaper00059477:hlh-2(RNAi)_regulated
WBPaper00059735:glucose_upregulated_lpin-1(RNAi)
WBPaper00059824:rnp-6(dh1127)_regulated_OP50
WBPaper00059824:rnp-6(dh1127)_regulated_S.aureus
WBPaper00059895:wounding_upregulated
WBPaper00060014:set-2(tm1630)_downregulated
WBPaper00060273:isp-1(qm150)_upregulated
WBPaper00060661:sensory-neuron_enriched
WBPaper00060811:L1_vs_adult_upregulated_neural
WBPaper00061007:HB101_upregulated
WBPaper00061007:S.aquatilis_upregulated
WBPaper00061081:E.faecalis_upregulated_N2
WBPaper00061203:let-418(n3536)_upregulated
WBPaper00061203:sin-3(tm1276)_upregulated
WBPaper00061203:spr-1(ok2144)_upregulated
WBPaper00061340:ADE
WBPaper00061340:ADF_AWB
WBPaper00061340:AIB
WBPaper00061340:AIN
WBPaper00061340:ALA
WBPaper00061340:ALN
WBPaper00061340:ASG_AWA
WBPaper00061340:ASI_parent
WBPaper00061340:AVA
WBPaper00061340:AVB
WBPaper00061340:AVD
WBPaper00061340:AVE
WBPaper00061340:AVG
WBPaper00061340:AVJ
WBPaper00061340:AVK
WBPaper00061340:AVL
WBPaper00061340:AWB
WBPaper00061340:CEPsh
WBPaper00061340:DD
WBPaper00061340:DVC
WBPaper00061340:I5
WBPaper00061340:IL1_parent
WBPaper00061340:Neuroblast_ASG_AWA
WBPaper00061340:Neuroblast_AVG_RIR
WBPaper00061340:Neuroblast_HSN_PHB
WBPaper00061340:Neuroblast_PVC_LUA
WBPaper00061340:Neuroblast_URX_CEPDx
WBPaper00061340:OLL_parent
WBPaper00061340:OLQ_parent
WBPaper00061340:Parent_of_exc_gland_AVK
WBPaper00061340:PLM_ALN_great_grandparent
WBPaper00061340:PVP
WBPaper00061340:RIA
WBPaper00061340:RIC
WBPaper00061340:RIH
WBPaper00061340:RIM
WBPaper00061340:RIS
WBPaper00061340:RIV
WBPaper00061340:RMD
WBPaper00061340:RME
WBPaper00061340:RMED
WBPaper00061340:SIA
WBPaper00061340:SIB
WBPaper00061340:SMB
WBPaper00061340:XXX
WBPaper00061341:28C_24h_upregulated
WBPaper00061341:28C_48h_upregulated
WBPaper00061479:hda-1(ne4752)_upregulated
WBPaper00061479:hrde-1(tm1200)_upregulated
WBPaper00061527:sol-1-jnk-1_18695
WBPaper00061651:AQR_enriched
WBPaper00061651:AVF_enriched
WBPaper00061651:AVJ_enriched
WBPaper00061651:DVB_enriched
WBPaper00061651:HSN_enriched
WBPaper00061651:IL2_LR_enriched
WBPaper00061651:PVW_enriched
WBPaper00061651:RMF_enriched
WBPaper00061651:VC_enriched
WBPaper00061902:camt-1(ok515)_regulated_RMG
WBPaper00061995:mter-4(syb3662syb3403)_downregulated
WBPaper00062103:neuron_enriched
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062193:skn-1(RNAi)_downregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062440:crh-1(n3315)_downregulated
WBPaper00062440:crh-1(syb385)_downregulated
WBPaper00062446:nhr-8(hd117)_upregulated
WBPaper00062497:xpf-1(tm2842)_upregulated
WBPaper00062672:let-418(n3536)dcp-66(RNAi)_upregulated
WBPaper00064088:Day-1-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-1-adult_vs_L4_downregulated_fem-3(q20)
WBPaper00064088:Day-1-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00064306:Agaro-oligosaccharides_upregulated
WBPaper00064661:lpd-3(ok2138)_upregulated
WBPaper00064871:hypoxia_downregulated_F2
WBPaper00065029:cadmium_upregulated
WBPaper00065096:25C_vs_20C_downregulated
WBPaper00065096:Day10_vs_Day1_upregulated
WBPaper00065149:lin-52(n771)_upregulated
WBPaper00065581:hpk-1(pk1393)_upregulated
WBPaper00065749:endu-2(tm4977)_upregulated
WBPaper00065749:Heat-Shock_downregulated_N2
WBPaper00065835:Day11_vs_Day1_upregulated
WBPaper00065841:17_0
WBPaper00065841:19_0
WBPaper00065841:25_1
WBPaper00065841:36_2
WBPaper00065841:36_3
WBPaper00065841:39_2
WBPaper00065841:39_3
WBPaper00065841:47_0
WBPaper00065841:50_0
WBPaper00065841:55_0
WBPaper00065841:60_0
WBPaper00065841:62_0
WBPaper00065841:66_0
WBPaper00065841:68_0
WBPaper00065841:68_1
WBPaper00065841:75_0
WBPaper00065841:80_0
WBPaper00065841:90_0
WBPaper00065841:94_0
WBPaper00065841:107_0
WBPaper00065841:108_0
WBPaper00065841:114_0
WBPaper00065841:118_0
WBPaper00065841:119_0
WBPaper00065841:122_0
WBPaper00065841:123_0
WBPaper00065841:130_0
WBPaper00065841:134_0
WBPaper00065841:137_0
WBPaper00065841:138_0
WBPaper00065841:139_0
WBPaper00065841:140_0
WBPaper00065841:145_0
WBPaper00065975:P-body_vs_WholeAnimal_depleted
WBPaper00065993:glp-1(e2141)_downregulated
WBPaper00066093:E.coli-purE_downregulated
WBPaper00066110:Cisplatin_upregulated_diploid
WBPaper00066110:tetraploid_vs_diploid_upregulated
cgc4386_cluster_6_5
cgc4489_group_2
WBPaper00024671:AFD_AWB_vs_unsorted_upregulated
WBPaper00025141:N2_Expressed_Genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00029437:dcr-1_upregulated
WBPaper00030839:Larval_A_Class
WBPaper00030839:Larval_Pan_Neuronal
WBPaper00031003:0hr_muscle_depleted
WBPaper00031003:24hr_muscle_depleted
WBPaper00031003:hlh_1_enriched
WBPaper00031003:total_muscle_depleted
WBPaper00031532:Larva_Pan_Neuronal_Enriched
WBPaper00034739:N2moreDR1350
WBPaper00035227:heat_shock_regulated
WBPaper00035588:alg-1(-)_upregulated
WBPaper00036130:mir-243_up_regulated
WBPaper00036286:Pattern_H
WBPaper00040963:Q100_down
WBPaper00040963:Q200_down
WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_24h
WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_51h
WBPaper00045263:0.1mM-paraquat_upregulated
WBPaper00045263:isp-1(qm150)_upregulated
WBPaper00045673:colistin_upregulated
WBPaper00046639:tyrosol_upregulated
WBPaper00048989:eat-2(ad465)_rapamycin_downregulated
WBPaper00057098:SiO2-nanoparticles_upregulated
[cgc6390]:Cluster_A
Interaction (26)
Anatomy_functionWBbtf0831
WBbtf0832
Map_infoMapVPosition4.81313Error0.003033
PositivePositive_cloneF15B9Inferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Mapping_dataMulti_point4295
4482
Reference (34)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene