WormBase Tree Display for Gene: WBGene00001110
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WBGene00001110 | Evidence | Person_evidence | WBPerson2345 | ||||||
---|---|---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | F38B7 | ||||||
Identity | Version | 1 | |||||||
Name | CGC_name | duo-1 | |||||||
Sequence_name | F38B7.5 | ||||||||
Molecular_name | F38B7.5 | ||||||||
F38B7.5.1 | |||||||||
CE47600 | |||||||||
Other_name | usp-1 | Accession_evidence | EMBL | AB095019 | |||||
CELE_F38B7.5 | Accession_evidence | NDB | BX284605 | ||||||
Public_name | duo-1 | ||||||||
DB_info | Database | AceView | gene | 5M37 | |||||
WormQTL | gene | WBGene00001110 | |||||||
WormFlux | gene | WBGene00001110 | |||||||
NDB | locus_tag | CELE_F38B7.5 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00001110|UniProtKB=Q7JLI8 | |||||||
family | PTHR12419 | ||||||||
NCBI | gene | 179586 | |||||||
RefSeq | protein | NM_073530.8 | |||||||
TREEFAM | TREEFAM_ID | TF323032 | |||||||
TrEMBL | UniProtAcc | Q7JLI8 | |||||||
UniProt_GCRP | UniProtAcc | Q7JLI8 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:23 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | duo | ||||||||
Allele (54) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00082182 | ||||||||
00082183 | |||||||||
00108285 | |||||||||
00108286 | |||||||||
Ortholog (20) | |||||||||
Paralog (21) | |||||||||
Structured_description | Automated_description | Predicted to enable cysteine-type deubiquitinase activity. Is an ortholog of human OTUD1 (OTU deubiquitinase 1). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F38B7.5 | |||||||
Corresponding_CDS_history | F38B7.5:wp95 | ||||||||
F38B7.5:wp231 | |||||||||
Corresponding_transcript | F38B7.5.1 | ||||||||
Other_sequence | AB095019 | ||||||||
CBC01724_1 | |||||||||
CR06994 | |||||||||
Experimental_info | RNAi_result (17) | ||||||||
Expr_pattern | Expr1021645 | ||||||||
Expr1030708 | |||||||||
Expr1150577 | |||||||||
Expr2011114 | |||||||||
Expr2029350 | |||||||||
Drives_construct | WBCnstr00037079 | ||||||||
Construct_product | WBCnstr00037079 | ||||||||
Microarray_results (20) | |||||||||
Expression_cluster (135) | |||||||||
Interaction (36) | |||||||||
Map_info | Map | V | Position | 3.20376 | Error | 0.001354 | |||
Positive | Positive_clone | F38B7 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Mapping_data | Multi_point | 5449 | |||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00010019 | ||||||||
WBPaper00030965 | |||||||||
WBPaper00036636 | |||||||||
WBPaper00055090 | |||||||||
WBPaper00059884 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |