WormBase Tree Display for Gene: WBGene00001079

WBGene00001079 SMap: S_parent: Sequence: T22B3
  Identity: Version: 1
    Name: CGC_name: dpy-20 Person_evidence: WBPerson261
      Sequence_name: T22B3.1
      Molecular_name: T22B3.1
        T22B3.1.1
        CE40520
      Other_name: CELE_T22B3.1 Accession_evidence: NDB BX284604
      Public_name: dpy-20
    DB_info: Database: AceView gene 4M462
        WormQTL gene WBGene00001079
        WormFlux gene WBGene00001079
        NDB locus_tag CELE_T22B3.1
        NCBI gene 178105
        RefSeq protein NM_069814.6
        SwissProt UniProtAcc P34807
        TREEFAM TREEFAM_ID TF320341
        UniProt_GCRP UniProtAcc P34807
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:23 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: dpy
    Reference_allele: WBVar00143888
    Allele (68)
    Legacy_information: e1282ts : medium dumpy (20x) weak dumpy (15x) strong dumpy round- nosed (25x). ES3 (25x all stages). ME2 (20x). NA4 (other alleles all strong dumpy (20x) almost inviable (15x) : e1362 e1415 e2017amber).
      See also e1362, e1415, e1422, e2017, e2480, s1711, s1774, s1776, s2033
      [C.elegansII] e1282ts : medium dumpy (20C), weak dumpy (15C), strong dumpy, round-nosed (25C). TSPduring L1 and L2 stages. ES3 (25C all stages). ME2 (20C). OA>10: other alleles mostly severe round-headed dumpy (20C), inviable or almost inviable (15C), e1362,e1415, cn142 (strongest allele), e2017amb (slightly weaker), cn322, etc. m474::Tc1 : strong dumpy, reverts to Dpy (m474s2033)or wild type (m474m495). Cloned: rare 1.9 kb RNA, most abundant in L2; encodes predicted 359aa novel protein. [Hosono et al. 1982; Clark et al. 1995; BC]
    Strain: WBStrain00022477
      WBStrain00022762
      WBStrain00023554
      WBStrain00023615
      WBStrain00026499
      WBStrain00026501
      WBStrain00026502
      WBStrain00026507
      WBStrain00026575
      WBStrain00026836
      WBStrain00026894
      WBStrain00026936
      WBStrain00027061
      WBStrain00027132
      WBStrain00027146
      WBStrain00027148
      WBStrain00027151
      WBStrain00027158
      WBStrain00027222
      WBStrain00027223
      WBStrain00027273
      WBStrain00027368
      WBStrain00027396
      WBStrain00028643
      WBStrain00028644
      WBStrain00028645
      WBStrain00028646
      WBStrain00028652
      WBStrain00028654
      WBStrain00028692
      WBStrain00028771
      WBStrain00028772
      WBStrain00028906
      WBStrain00028907
      WBStrain00028909
      WBStrain00028910
      WBStrain00028912
      WBStrain00028948
      WBStrain00028954
      WBStrain00028955
      WBStrain00028956
      WBStrain00028957
      WBStrain00028958
      WBStrain00028959
      WBStrain00028960
      WBStrain00028961
      WBStrain00028962
      WBStrain00028963
      WBStrain00028964
      WBStrain00028965
      WBStrain00028966
      WBStrain00028967
      WBStrain00028968
      WBStrain00028969
      WBStrain00028970
      WBStrain00028971
      WBStrain00028980
      WBStrain00028981
      WBStrain00028982
      WBStrain00028983
      WBStrain00028984
      WBStrain00028997
      WBStrain00029005
      WBStrain00029006
      WBStrain00029008
      WBStrain00029027
      WBStrain00029120
      WBStrain00029122
      WBStrain00029126
      WBStrain00029332
      WBStrain00030574
      WBStrain00030585
      WBStrain00030809
      WBStrain00030814
      WBStrain00030815
      WBStrain00030841
      WBStrain00030843
      WBStrain00030844
      WBStrain00030846
      WBStrain00030847
      WBStrain00030850
      WBStrain00030853
      WBStrain00030854
      WBStrain00030858
      WBStrain00030859
      WBStrain00030860
      WBStrain00030861
      WBStrain00030871
      WBStrain00030872
      WBStrain00030874
      WBStrain00030876
      WBStrain00030882
      WBStrain00030883
      WBStrain00030938
      WBStrain00033487
      WBStrain00034110
      WBStrain00034368
      WBStrain00034441
      WBStrain00034706
      WBStrain00034921
      WBStrain00034924
      WBStrain00034925
      WBStrain00035051
      WBStrain00035167
      WBStrain00040221
      WBStrain00040569
      WBStrain00040573
      WBStrain00000396
      WBStrain00000397
      WBStrain00000406
      WBStrain00000407
      WBStrain00000409
      WBStrain00000414
      WBStrain00000416
      WBStrain00000417
      WBStrain00003953
      WBStrain00004289
      WBStrain00004505
      WBStrain00004509
      WBStrain00004510
      WBStrain00004511
      WBStrain00004514
      WBStrain00004515
      WBStrain00004516
      WBStrain00004517
      WBStrain00004545
      WBStrain00004561
      WBStrain00004582
      WBStrain00004825
      WBStrain00004826
      WBStrain00004829
      WBStrain00004833
      WBStrain00004836
      WBStrain00004837
      WBStrain00005460
      WBStrain00005466
      WBStrain00005468
      WBStrain00005833
      WBStrain00006186
      WBStrain00006265
      WBStrain00007247
      WBStrain00007445
      WBStrain00007446
      WBStrain00007447
      WBStrain00007448
      WBStrain00007449
      WBStrain00007450
      WBStrain00007451
      WBStrain00008027
      WBStrain00008030
      WBStrain00008039
      WBStrain00008040
      WBStrain00008041
      WBStrain00008042
      WBStrain00008043
      WBStrain00008044
      WBStrain00008045
      WBStrain00008046
      WBStrain00008047
      WBStrain00008048
      WBStrain00008049
      WBStrain00008050
      WBStrain00008016
      WBStrain00008450
      WBStrain00008445
      WBStrain00007590
      WBStrain00004583
      WBStrain00035165
      WBStrain00033484
      WBStrain00022482
      WBStrain00044170
      WBStrain00054935
      WBStrain00054938
      WBStrain00054934
      WBStrain00054937
      WBStrain00054744
      WBStrain00054936
    RNASeq_FPKM (74)
    GO_annotation: 00044559
      00044560
      00044561
      00044562
      00108206
    Ortholog (27)
    Structured_description: Concise_description: dpy-20 encodes a BED zinc finger protein, with no known homologs outside of nematodes, that is required for normal body morphology. Paper_evidence: WBPaper00000609
            WBPaper00002182
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Enables sequence-specific double-stranded DNA binding activity. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T22B3.1
    Corresponding_CDS_history: T22B3.1:wp166
    Corresponding_transcript: T22B3.1.1
    Other_sequence: EY467652.1
      ACC10421_1
      Dviv_isotig16525
      Dviv_isotig16524
      Acan_isotig18415
    Associated_feature: WBsf668360
      WBsf997910
      WBsf997911
      WBsf997912
      WBsf1018244
      WBsf1018245
      WBsf1018246
    Transcription_factor: WBTranscriptionFactor000478
  Experimental_info: RNAi_result (17)
    Expr_pattern: Expr1012656
      Expr1157340
      Expr2011063
      Expr2029300
    Drives_construct: WBCnstr00006715
      WBCnstr00006803
      WBCnstr00019441
      WBCnstr00037093
    Construct_product (5)
    Microarray_results (21)
    Expression_cluster (184)
    Interaction (39)
  Map_info: Map: IV Position: 5.21542 Error: 0.003855
    Well_ordered
    Positive: Inside_rearr: nDf27
        sDf8
      Positive_clone: BC#L302
        T22B3 Inferred_automatically: From sequence, transcript, pseudogene data
    Negative: Outside_rearr: nDf28
        mDp4
    Mapping_data: 2_point (21)
      Multi_point (169)
      Pos_neg_data (28)
    Landmark_gene
  Reference (108)
  Method: Gene