WormBase Tree Display for Gene: WBGene00001000
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| WBGene00001000 | Evidence | CGC_data_submission | |||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | C18A11 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | dim-1 | Person_evidence | WBPerson427 | |||||
| Sequence_name | C18A11.7 | ||||||||
| Molecular_name | C18A11.7a | ||||||||
| C18A11.7a.1 | |||||||||
| CE27706 | |||||||||
| C18A11.7b | |||||||||
| CE04038 | |||||||||
| C18A11.7b.1 | |||||||||
| Other_name | CELE_C18A11.7 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | dim-1 | ||||||||
| DB_info | Database | AceView | gene | XI670 | |||||
| WormQTL | gene | WBGene00001000 | |||||||
| WormFlux | gene | WBGene00001000 | |||||||
| NDB | locus_tag | CELE_C18A11.7 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00001000|UniProtKB=Q18066 | |||||||
| family | PTHR13817 | ||||||||
| NCBI | gene | 181062 | |||||||
| RefSeq | protein | NM_001029249.6 | |||||||
| NM_001029250.5 | |||||||||
| SwissProt | UniProtAcc | Q18066 | |||||||
| UniProt_GCRP | UniProtAcc | Q18066 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:22 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | dim | ||||||||
| Allele (142) | |||||||||
| Strain | WBStrain00035507 | ||||||||
| WBStrain00005872 | |||||||||
| WBStrain00005864 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00060110 | ||||||||
| 00060111 | |||||||||
| Ortholog | WBGene00036697 | Caenorhabditis briggsae | From_analysis | Hillier-set | |||||
| OrthoMCL | |||||||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| WBGene00121936 | Caenorhabditis japonica | From_analysis | Inparanoid_8 | ||||||
| WormBase-Compara | |||||||||
| WBGene00051213 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | ||||||
| WormBase-Compara | |||||||||
| WBGene00036696 | Caenorhabditis briggsae | From_analysis | WormBase-Compara | ||||||
| WBGene00222551 | Brugia malayi | From_analysis | WormBase-Compara | ||||||
| CBOVI.g3138 | Caenorhabditis bovis | From_analysis | WormBase-Compara | ||||||
| CSP21.g15458 | Caenorhabditis parvicauda | From_analysis | WormBase-Compara | ||||||
| CSP26.g10041 | Caenorhabditis zanzibari | From_analysis | WormBase-Compara | ||||||
| CSP28.g17596 | Caenorhabditis panamensis | From_analysis | WormBase-Compara | ||||||
| CSP29.g16118 | Caenorhabditis becei | From_analysis | WormBase-Compara | ||||||
| CSP31.g21720 | Caenorhabditis uteleia | From_analysis | WormBase-Compara | ||||||
| CSP32.g4089 | Caenorhabditis sulstoni | From_analysis | WormBase-Compara | ||||||
| CSP38.g13630 | Caenorhabditis quiockensis | From_analysis | WormBase-Compara | ||||||
| CSP39.g27358 | Caenorhabditis waitukubuli | From_analysis | WormBase-Compara | ||||||
| CSP40.g16638 | Caenorhabditis tribulationis | From_analysis | WormBase-Compara | ||||||
| Cang_2012_03_13_01949.g16842 | Caenorhabditis angaria | From_analysis | WormBase-Compara | ||||||
| Cang_2012_03_13_10157.g22491 | Caenorhabditis angaria | From_analysis | WormBase-Compara | ||||||
| Cang_2012_03_13_16735.g25463 | Caenorhabditis angaria | From_analysis | WormBase-Compara | ||||||
| Cnig_chr_X.g24956 | Caenorhabditis nigoni | From_analysis | WormBase-Compara | ||||||
| Csp11.Scaffold630.g18880 | Caenorhabditis tropicalis | From_analysis | WormBase-Compara | ||||||
| Csp5_scaffold_00514.g12350 | Caenorhabditis sinica | From_analysis | WormBase-Compara | ||||||
| FL83_00042 | Caenorhabditis latens | From_analysis | WormBase-Compara | ||||||
| GCK72_024891 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||||
| OTIPU.nOt.2.0.1.g00557 | Oscheius tipulae | From_analysis | WormBase-Compara | ||||||
| Pan_g8029 | Panagrellus redivivus | From_analysis | WormBase-Compara | ||||||
| Sp34_X0215700 | Caenorhabditis inopinata | From_analysis | WormBase-Compara | ||||||
| chrX_pilon.g19505 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00242036 | Onchocerca volvulus | From_analysis | WormBase-Compara | ||||||
| WBGene00265561 | Strongyloides ratti | From_analysis | WormBase-Compara | ||||||
| WBGene00294895 | Trichuris muris | From_analysis | WormBase-Compara | ||||||
| WBGene00297509 | Trichuris muris | From_analysis | WormBase-Compara | ||||||
| Paralog (12) | |||||||||
| Structured_description | Concise_description | dim-1 encodes novel proteins containing three immunoglobulin-like repeats in the carboxy terminus; dim-1 was originally identified in screens for mutations that suppress locomotion defects caused by aberrant muscle assembly in animals carrying a missense mutation in unc-112, which encodes a pleckstrin homology domain-containing protein required for the early stages of muscle assembly; loss-of-function mutations in dim-1 indicate that DIM-1 is required for fully normal muscle organization and proper anchoring of the myofilament lattice to the muscle cell membrane; a DIM-1(S)::GFP fusion protein made with the shorter of the DIM-1 isoforms localizes to an area adjacent to the muscle cell membrane, around and between the dense bodies; the DIM-1(S) isoform is sufficient for rescue of muscle structure and stability in dim-1 mutant hermaphrodites. | Paper_evidence | WBPaper00005804 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 16 Apr 2008 00:00:00 | ||||||||
| Automated_description | Predicted to be located in cytoplasm. Expressed in body wall musculature. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C18A11.7a | |||||||
| C18A11.7b | |||||||||
| Corresponding_transcript | C18A11.7a.1 | ||||||||
| C18A11.7b.1 | |||||||||
| Other_sequence (144) | |||||||||
| Associated_feature (23) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00081085 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00091782 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00010958 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00091778 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00040878 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr2452 | ||||||||
| Expr1020520 | |||||||||
| Expr1030623 | |||||||||
| Expr1144924 | |||||||||
| Expr2010929 | |||||||||
| Expr2029168 | |||||||||
| Drives_construct | WBCnstr00010841 | ||||||||
| WBCnstr00037148 | |||||||||
| Construct_product | WBCnstr00010841 | ||||||||
| WBCnstr00037148 | |||||||||
| Antibody | WBAntibody00000614 | ||||||||
| WBAntibody00002420 | |||||||||
| Microarray_results (29) | |||||||||
| Expression_cluster (266) | |||||||||
| Interaction (129) | |||||||||
| Map_info | Map | X | Position | -0.639521 | Error | 0.015765 | |||
| Positive | Positive_clone | C18A11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 4259 | |||||||
| 4750 | |||||||||
| Pseudo_map_position | |||||||||
| Reference (24) | |||||||||
| Remark | Sequence connection from [Moerman DG] | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
