WormBase Tree Display for Gene: WBGene00000979
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| WBGene00000979 | SMap | S_parent | Sequence | C10F3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | dhs-16 | Person_evidence | WBPerson651 | |||||
| Sequence_name | C10F3.2 | ||||||||
| Molecular_name | C10F3.2 | ||||||||
| C10F3.2.1 | |||||||||
| CE08067 | |||||||||
| Other_name | CELE_C10F3.2 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | dhs-16 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:22 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | dhs | ||||||||
| Allele (29) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (11) | |||||||||
| Ortholog (48) | |||||||||
| Paralog (38) | |||||||||
| Structured_description | Concise_description | dhs-16 encodes a short-chain dehydrogenase predicted to be mitochondrial. | Paper_evidence | WBPaper00004424 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Enables steroid dehydrogenase activity. Involved in steroid catabolic process. Predicted to be located in intracellular membrane-bounded organelle. Expressed in head neurons; hypodermis; tail neurons; and terminal bulb. Human ortholog(s) of this gene implicated in autosomal recessive congenital ichthyosis 13; fundus albipunctatus; and night blindness. Is an ortholog of several human genes including DHRS9 (dehydrogenase/reductase 9); HSD17B6 (hydroxysteroid 17-beta dehydrogenase 6); and RDH5 (retinol dehydrogenase 5). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0080257 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:29958) | ||||
| DOID:11105 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9940) | ||||||
| DOID:8499 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9940) | ||||||
| Molecular_info | Corresponding_CDS | C10F3.2 | |||||||
| Corresponding_transcript | C10F3.2.1 | ||||||||
| Other_sequence (16) | |||||||||
| Associated_feature | WBsf231823 | ||||||||
| WBsf231824 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00010600 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00040301 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00102767 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00040302 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00028781 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr10029 | ||||||||
| Expr1028327 | |||||||||
| Expr1030610 | |||||||||
| Expr1144375 | |||||||||
| Expr2010899 | |||||||||
| Expr2029138 | |||||||||
| Drives_construct | WBCnstr00014804 | ||||||||
| WBCnstr00037163 | |||||||||
| Construct_product | WBCnstr00014804 | ||||||||
| WBCnstr00037163 | |||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (162) | |||||||||
| Interaction (18) | |||||||||
| Map_info | Map | V | Position | -0.47285 | Error | 0.012515 | |||
| Positive | Positive_clone | C10F3 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Mapping_data | Multi_point | 5213 | |||||||
| 4142 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00034311 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00038761 | |||||||||
| WBPaper00040978 | |||||||||
| WBPaper00040980 | |||||||||
| WBPaper00042257 | |||||||||
| WBPaper00044716 | |||||||||
| WBPaper00045631 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00060365 | |||||||||
| WBPaper00061385 | |||||||||
| WBPaper00062617 | |||||||||
| WBPaper00065580 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
